CoexViewer
Coexpression detail for PDIL1-2 and SHD
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | PDIL1-2 | PDI-like 1-2 | 844087 | At1g77510 | 0.84 | 16.70 | 15.56 | 13.32 | 9.80 | 1.45 | 4.66 | 5.09 | 4.99 | 5.22 | 11.81 | |
| ath | SHD | Chaperone protein htpG family protein | 828520 | At4g24190 | 0.84 |
|
coex z = 15.5573 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 844087 (z-scored expression) |
828520 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 30.6 | -5.8 | -5.3 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 28.5 | -5.0 | -5.7 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 22.7 | -5.0 | -4.6 | SRP090458 | SRR4295856 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] |
| 20.6 | 4.5 | 4.6 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 18.7 | -4.2 | -4.4 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 15.8 | -3.9 | -4.1 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 14.5 | -3.8 | -3.9 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.0 | -3.6 | -3.9 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 13.8 | -3.9 | -3.5 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 13.8 | -3.8 | -3.6 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 13.4 | 3.1 | 4.4 | SRP254177 | SRR11429303 | Time course of brassinolide treatment on Arabidopsis seedlings |
| 13.4 | -3.7 | -3.6 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.0 | -3.0 | -4.3 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 12.9 | -3.3 | -3.9 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 12.8 | -3.6 | -3.6 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 12.6 | 3.5 | 3.6 | SRP277946 | SRR12469638 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.6 | 3.5 | 3.6 | SRP095347 | SRR5120428 | Genetic influences on gene expression in Arabidopsis thaliana |
| 12.6 | -3.1 | -4.0 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.0 | 3.5 | 3.4 | SRP017386 | SRR627642 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 11.5 | 3.8 | 3.0 | SRP126290 | SRR6356048 | RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells |
| 11.4 | 3.8 | 3.0 | SRP126290 | SRR6356047 | RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells |
| 11.4 | -3.4 | -3.3 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 11.0 | -3.4 | -3.3 | SRP073487 | SRR3401835 | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
| 10.9 | 3.2 | 3.4 | SRP271641 | SRR12211746 | Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold |
| 10.9 | 3.4 | 3.2 | SRP017386 | SRR627641 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 10.6 | 3.4 | 3.1 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.5 | -3.4 | -3.1 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.5 | -3.1 | -3.4 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.4 | 3.3 | 3.1 | SRP277946 | SRR12470200 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.1 | 3.5 | 2.9 | SRP114806 | SRR5894630 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.0 | 3.0 | 3.3 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
The preparation time of this page was 0.9 [sec].
