CoexViewer
Coexpression detail for APT2 and IPT3
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | APT2 | adenine phosphoribosyl transferase 2 | 844345 | At1g80050 | 0.38 | 4.23 | 3.50 | 3.82 | 12.80 | 0.18 | 2.73 | 2.16 | 3.15 | 0.88 | 1.05 | |
| ath | IPT3 | isopentenyltransferase 3 | 825486 | At3g63110 | 0.38 |
|
coex z = 3.5021 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 844345 (z-scored expression) |
825486 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 26.7 | -5.2 | -5.1 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 16.8 | 2.8 | 6.1 | SRP325022 | SRR14877282 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 15.4 | -3.8 | -4.1 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 14.7 | 2.7 | 5.3 | SRP325022 | SRR14877283 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 14.7 | -5.3 | -2.8 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 14.6 | -4.7 | -3.1 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 14.3 | -3.6 | -3.9 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 14.1 | -3.2 | -4.4 | SRP114806 | SRR5894492 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 14.0 | -4.5 | -3.1 | ERP116123 | ERR3414879 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 13.9 | -4.7 | -2.9 | SRP091641 | SRR4426858 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.2 | -3.0 | -4.4 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 12.9 | -4.7 | -2.8 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 12.3 | -4.0 | -3.1 | SRP018034 | SRR2079784 | Time-course transcriptome of wild-type Arabidopsis leaf |
| 12.0 | -4.0 | -3.0 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 11.7 | -3.9 | -3.0 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 11.7 | -3.3 | -3.6 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.7 | -2.1 | -5.5 | SRP100064 | SRR5263228 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 11.6 | -3.6 | -3.2 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 11.4 | -4.7 | -2.4 | SRP091641 | SRR4426949 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.9 | -3.5 | -3.1 | SRP150217 | SRR7289585 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.9 | -3.3 | -3.3 | SRP148699 | SRR7204079 | An essential role for Abscisic acid in the regulation of xylem fibre differentiation |
| 10.9 | -3.2 | -3.4 | SRP266133 | SRR11934633 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.8 | 2.6 | 4.2 | SRP150997 | SRR7405098 | Calmodulin-binding transcription activator (CAMTA) 6 is a key regulator of Na+ homeostasis and salinity stress responses during early germination |
| 10.8 | -4.7 | -2.3 | SRP091641 | SRR4426356 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.1 | -3.7 | -2.8 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.1 | -2.8 | -3.6 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 10.0 | -3.5 | -2.9 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
The preparation time of this page was 0.8 [sec].
