CoexViewer
Coexpression detail for APT2 and AT1G29530
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | APT2 | adenine phosphoribosyl transferase 2 | 844345 | At1g80050 | 0.38 | 0.87 | 0.78 | 0.73 | 191.10 | 1.03 | 2.30 | 1.04 | 3.16 | -0.32 | 0.80 | |
| ath | AT1G29530 | uncharacterized protein | 839830 | At1g29530 | 0.38 |
|
coex z = 0.7751 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 844345 (z-scored expression) |
839830 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 30.8 | -5.2 | -5.9 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 25.2 | -5.3 | -4.7 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 18.7 | -4.7 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 18.6 | -3.8 | -4.9 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 15.5 | -3.6 | -4.3 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 14.9 | -5.1 | -2.9 | SRP220476 | SRR10072753 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 14.8 | -2.8 | -5.3 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 14.4 | -3.9 | -3.7 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 14.3 | -3.0 | -4.7 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 14.1 | -4.0 | -3.5 | SRP018034 | SRR2079784 | Time-course transcriptome of wild-type Arabidopsis leaf |
| 13.9 | -3.5 | -4.0 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 13.4 | -4.0 | -3.3 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 13.3 | 4.7 | 2.8 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.2 | -3.6 | -3.7 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 13.0 | -4.7 | -2.7 | SRP091641 | SRR4426949 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.9 | -3.4 | -3.8 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 12.5 | -4.5 | -2.8 | ERP116123 | ERR3414913 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 12.3 | -4.1 | -3.0 | SRP220476 | SRR10072755 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 12.3 | -4.7 | -2.6 | SRP091641 | SRR4426351 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.2 | 2.6 | 4.7 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.1 | 3.5 | 3.5 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 12.1 | 4.0 | 3.0 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.9 | -3.7 | -3.2 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.7 | -4.3 | -2.8 | SRP086629 | SRR4175056 | A global view of RNA-protein interactions reveals novel root hair cell fate regulators |
| 11.7 | 3.0 | 4.0 | SRP277946 | SRR12470185 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.7 | -4.7 | -2.5 | SRP091641 | SRR4426858 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.5 | -3.4 | -3.4 | ERP109739 | ERR2683774 | Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway |
| 11.3 | -3.7 | -3.1 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.9 | -2.9 | -3.8 | SRP157719 | SRR7688898 | Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC] |
| 10.9 | -3.2 | -3.4 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.9 | -3.3 | -3.3 | SRP073485 | SRR3401780 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 10.9 | 2.6 | 4.1 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.7 | -4.5 | -2.4 | ERP116123 | ERR3414901 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.7 | -2.8 | -3.9 | SRP239091 | SRR10804769 | Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants |
| 10.6 | -4.7 | -2.2 | SRP091641 | SRR4426355 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.6 | -2.8 | -3.8 | SRP091641 | SRR4426344 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.4 | -3.3 | -3.2 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.2 | 3.0 | 3.4 | SRP189792 | SRR8800692 | Role of AtMLKLs in response to powdery mildew fungus |
| 10.2 | -4.7 | -2.1 | SRP091641 | SRR4426356 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.1 | -3.0 | -3.3 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.1 | -2.8 | -3.7 | SRP159259 | SRR7774155 | Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. |
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