CoexViewer
Coexpression detail for APT2 and NRT1.5
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | APT2 | adenine phosphoribosyl transferase 2 | 844345 | At1g80050 | 0.38 | 3.37 | 2.90 | 2.92 | 329.10 | -0.88 | 2.81 | 2.69 | 0.47 | 3.36 | 1.16 | |
| ath | NRT1.5 | nitrate transporter 1.5 | 840139 | At1g32450 | 0.38 |
|
coex z = 2.9035 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 844345 (z-scored expression) |
840139 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 26.1 | -4.7 | -5.6 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 17.6 | -4.7 | -3.7 | SRP091641 | SRR4426858 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 17.5 | -5.2 | -3.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 17.5 | -3.6 | -4.8 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 16.9 | 4.7 | 3.6 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 16.4 | -2.8 | -5.8 | SRP100064 | SRR5263046 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 16.2 | -4.7 | -3.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.8 | -3.4 | -4.7 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 14.8 | -4.7 | -3.1 | SRP091641 | SRR4426949 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 14.1 | -4.7 | -3.0 | SRP091641 | SRR4426356 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.0 | -3.7 | -3.6 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.7 | -3.8 | -3.4 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 12.6 | -3.3 | -3.8 | SRP073485 | SRR3401780 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 12.2 | -3.6 | -3.4 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 12.2 | -3.9 | -3.1 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 11.8 | -2.8 | -4.3 | SRP239091 | SRR10804769 | Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants |
| 11.7 | -2.8 | -4.2 | SRP100064 | SRR5263044 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 11.5 | 4.0 | 2.8 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.5 | -3.2 | -3.6 | SRP266133 | SRR11934633 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.9 | -3.3 | -3.3 | SRP371011 | SRR18808232 | Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation |
| 10.8 | -3.7 | -2.9 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 10.4 | -2.8 | -3.8 | SRP100064 | SRR5263048 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 10.3 | 3.5 | 3.0 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.2 | -5.3 | -1.9 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.1 | -2.5 | -4.1 | SRP110167 | SRR5742217 | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
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