cis; CCCCCCC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCCCCCC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCCCCCC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.51At4g36990heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4) ((AT-HSFB1, ATHSF4, HSF4)) HSF
-0.50At3g10500no apical meristem (NAM) family protein NAC
-0.49At5g05410DRE-binding protein (DREB2A) ((DREB2A)) AP2-EREBP
-0.49At5g20910zinc finger (C3HC4-type RING finger) family protein C3H
-0.48At3g01970WRKY family transcription factor ((WRKY45)) WRKY
-0.47At3g04070no apical meristem (NAM) family protein NAC
-0.47At1g67970heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5) ((AT-HSFA8)) HSF
-0.45At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.45At5g38140histone-like transcription factor (CBF/NF-Y) family protein CCAAT-HAP5
-0.45At1g62300WRKY family transcription factor ((WRKY6)) WRKY
-0.45At5g13080WRKY family transcription factor ((WRKY75)) WRKY
-0.44At1g63840zinc finger (C3HC4-type RING finger) family protein C3H
0.44At3g60630scarecrow transcription factor family protein GRAS
0.44At1g26150protein kinase family protein Trihelix
-0.43At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC

link to other 304 cis elements in ATTED

similar seq.
←CCCCCCC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GGGGGGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCCCCCC1.000.061