cis; GCTTGCA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GCTTGCA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GCTTGCA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.49At5g63470CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
-0.47At3g10500no apical meristem (NAM) family protein NAC
0.47At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.45At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
-0.45At4g36990heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4) ((AT-HSFB1, ATHSF4, HSF4)) HSF
0.45At5g63780zinc finger (C3HC4-type RING finger) family protein C3H
-0.44At1g42990bZIP transcription factor family protein bZIP
-0.44At1g63840zinc finger (C3HC4-type RING finger) family protein C3H
0.43At4g36540basic helix-loop-helix (bHLH) family protein BHLH
-0.43At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.42At4g01460basic helix-loop-helix (bHLH) family protein BHLH
0.42At2g18300basic helix-loop-helix (bHLH) family protein BHLH
-0.40At2g43000no apical meristem (NAM) family protein NAC

link to other 304 cis elements in ATTED

similar seq.
←GCTTGCA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGCAAGC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GCTTGCA1.000.0718