cis; GGTACCC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 GTAC   CURECORECR [ref] [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GGTACCC

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GGTACCC.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.44At1g30500CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CCAAT-HAP2
0.44At1g54160CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CCAAT-HAP2
0.43At5g19430zinc finger (C3HC4-type RING finger) family protein C3H
-0.41At3g48100two-component responsive regulator / response regulator 5 (ARR5) / response reactor 2 (RR2) ((ARR2, ARR5)) ARR-B

link to other 304 cis elements in ATTED

similar seq.
←GGTACCC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GGGTACC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GGTACCC1.000.08146