[←][→] ath   At1g01260 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010629 [list] [network] negative regulation of gene expression  (396 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001077440.1  NP_001184883.1  NP_171634.1 
BLAST NP_001077440.1  NP_001184883.1  NP_171634.1 
Orthologous [Ortholog page] AIB (ath)  LOC4327781 (osa)  LOC7486777 (ppo)  LOC7497257 (ppo)  LOC25499766 (mtr)  LOC25500670 (mtr)  LOC100801502 (gma)  LOC100804434 (gma)  LOC100807078 (gma)  LOC100819439 (gma)  LOC101247327 (sly)  LOC101254734 (sly)  LOC103844637 (bra)  LOC103866281 (bra)  LOC103866461 (bra)  LOC123060832 (tae)  LOC123069405 (tae)  LOC123077905 (tae)  LOC123084858 (tae)  LOC123093235 (tae)  LOC123098496 (tae)  LOC123443287 (hvu)  LOC123449506 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for NP_001077440.1)
nucl 9,  cyto 1,  mito 1  (predict for NP_001184883.1)
nucl 9,  cyto 1,  mito 1  (predict for NP_171634.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001077440.1)
other 6  (predict for NP_001184883.1)
other 6  (predict for NP_171634.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath00908 Zeatin biosynthesis 2
Genes directly connected with AT1G01260 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 RCF3 RNA-binding KH domain-containing protein [detail] 835386
6.0 CKX5 cytokinin oxidase 5 [detail] 843881
5.6 AT2G18090 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein [detail] 816321
Coexpressed
gene list		 [Coexpressed gene list for AT1G01260]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261050_at
261050_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261050_at
261050_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261050_at
261050_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839545      
Refseq ID (protein) NP_001077440.1 
NP_001184883.1 
NP_171634.1 


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