[←][→] ath   At1g12860 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010444 [list] [network] guard mother cell differentiation  (11 genes)  IMP  
GO:0050826 [list] [network] response to freezing  (27 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001320452.1  NP_001320453.1  NP_172746.2 
BLAST NP_001320452.1  NP_001320453.1  NP_172746.2 
Orthologous [Ortholog page] ICE1 (ath)  LOC4326959 (osa)  LOC4350609 (osa)  LOC7454596 (ppo)  LOC7457576 (ppo)  LOC11440995 (mtr)  LOC25491140 (mtr)  LOC100146096 (tae)  LOC100146097 (tae)  ICE1 (gma)  ICE2 (gma)  ICE3 (gma)  ICE4 (gma)  LOC100804797 (gma)  ICEE (gma)  ICE1a (sly)  LOC101266110 (sly)  LOC103836134 (bra)  LOC103846282 (bra)  LOC103854299 (bra)  LOC103871973 (bra)  LOC103875273 (bra)  LOC123063201 (tae)  LOC123072107 (tae)  LOC123082345 (tae)  LOC123094372 (tae)  LOC123147475 (tae)  LOC123162127 (tae)  LOC123168446 (tae)  LOC123411444 (hvu)  LOC123445315 (hvu)  LOC123451060 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001320452.1)
nucl 9  (predict for NP_001320453.1)
nucl 9  (predict for NP_172746.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001320452.1)
other 9  (predict for NP_001320453.1)
other 9  (predict for NP_172746.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
Genes directly connected with SCRM2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 TMM Leucine-rich repeat (LRR) family protein [detail] 844348
6.7 AT4G01460 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 828089
6.5 iqd21 IQ-domain 21 [detail] 824087
6.4 ICE1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 822287
Coexpressed
gene list		 [Coexpressed gene list for SCRM2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261196_at
261196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261196_at
261196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261196_at
261196_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837843      
Refseq ID (protein) NP_001320452.1 
NP_001320453.1 
NP_172746.2 


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