[][] ath   AT1G13260 Gene
functional annotation
Function   related to ABI3/VP1 1
GO BP
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0009741 [list] [network] response to brassinosteroid  (109 genes)  IEP  
GO:0048527 [list] [network] lateral root development  (117 genes)  IMP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IDA  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
KEGG
Protein NP_172784.1 
BLAST NP_172784.1 
Orthologous [Ortholog page] RAV (gma)EDF3 (ath)TEM1 (ath)RAV2 (ath)LOC4325650 (osa)LOC4339522 (osa)LOC7466917 (ppo)LOC11422381 (mtr)LOC11436458 (mtr)LOC100251473 (vvi)LOC100262843 (vvi)LOC100273875 (zma)LOC100284738 (zma)RAV1 (gma)LOC100789009 (gma)LOC100801107 (gma)LOC101259430 (sly)RAV2 (sly)LOC103626167 (zma)LOC103635292 (zma)LOC103835464 (bra)LOC103840594 (bra)LOC103843064 (bra)LOC103852529 (bra)LOC103853887 (bra)LOC103871946 (bra)LOC103875354 (bra)LOC107277455 (osa)
Subcellular
localization
wolf
nucl 9  (predict for NP_172784.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for NP_172784.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
Genes directly connected with RAV1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
11.2 TEM1 AP2/B3 transcription factor family protein [detail] 839143
7.5 RAV2 related to ABI3/VP1 2 [detail] 843216
7.3 ERF-1 ethylene responsive element binding factor 1 [detail] 827464
Coexpressed
gene list
[Coexpressed gene list for RAV1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259364_at
259364_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259364_at
259364_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
259364_at
259364_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 837886    
Refseq ID (protein) NP_172784.1 


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