ATTED-II : GeneID search result

[←][→] ath AT1G17460 Gene

functional annotation

Function

TRF-like 3

GO BP

GO CC

GO:0022626 [list] [network] cytosolic ribosome	(317 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IPI
GO:0003677 [list] [network] DNA binding	(2280 genes)	IEA

KEGG

Protein

NP_001185023.1 NP_001321911.1 NP_564025.2

BLAST

NP_001185023.1 NP_001321911.1 NP_564025.2

Orthologous

[Ortholog page] TRFL6 (ath) LOC4330901 (osa) LOC7478109 (ppo) LOC11429459 (mtr) LOC100263481 (vvi) LOC100383302 (zma) LOC100775511 (gma) LOC100777434 (gma) LOC100782501 (gma) LOC101258446 (sly) LOC103830781 (bra) LOC103831454 (bra) LOC103831770 (bra) LOC103872532 (bra)

Subcellular
localization
wolf

nucl 8, chlo 1, cyto 1, vacu 1	(predict for NP_001185023.1)
nucl 7, cyto 2	(predict for NP_001321911.1)
nucl 8, chlo 1, cyto 1, vacu 1	(predict for NP_564025.2)

Subcellular
localization
TargetP

other 8	(predict for NP_001185023.1)
other 8	(predict for NP_001321911.1)
other 8	(predict for NP_564025.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with TRFL3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.7	AT3G42860	zinc knuckle (CCHC-type) family protein	[detail]	823332
4.5	AT2G26200	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[detail]	817160
4.5	AT4G12750	Homeodomain-like transcriptional regulator	[detail]	826887
3.7	HSFA3	heat shock transcription factor A3	[detail]	831749

Coexpressed
gene list

[Coexpressed gene list for TRFL3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261086_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261086_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261086_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838319
Refseq ID (protein)	NP_001185023.1
	NP_001321911.1
	NP_564025.2

The preparation time of this page was 0.1 [sec].