ATTED-II : GeneID search result

[←][→] ath AT1G21450 Gene

functional annotation

Function

SCARECROW-like 1

GO BP

GO:0006355 [list] [network] regulation of transcription, DNA-templated

(1984 genes)

TAS

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA ISM

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IBA
GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	IBA ISS

KEGG

Protein

NP_173566.1

BLAST

NP_173566.1

Orthologous

[Ortholog page] LOC4324850 (osa) LOC7466426 (ppo) LOC25482425 (mtr) LOC25489758 (mtr) GRAS6 (sly) LOC100253954 (vvi) LOC100788103 (gma) LOC100796434 (gma) LOC100798897 (gma) LOC100807048 (gma) LOC100854518 (vvi) LOC103630377 (zma) LOC103829376 (bra) LOC103872980 (bra)

Subcellular
localization
wolf

nucl 6, cyto_nucl 5, cyto 3

(predict for NP_173566.1)

Subcellular
localization
TargetP

mito 5, other 3

(predict for NP_173566.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SCL1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.4	SCL5	scarecrow-like 5	[detail]	841482
6.1	CRK3	cysteine-rich RLK (RECEPTOR-like protein kinase) 3	[detail]	843390
5.2	AT2G34730	myosin heavy chain-like protein	[detail]	818038

Coexpressed
gene list

[Coexpressed gene list for SCL1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260878_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260878_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260878_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838743
Refseq ID (protein)	NP_173566.1

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