ATTED-II : GeneID search result

[←][→] ath AT1G43160 Gene

functional annotation

Function

related to AP2 6

GO BP

GO:0034605 [list] [network] cellular response to heat	(67 genes)	IEP
GO:0009873 [list] [network] ethylene-activated signaling pathway	(191 genes)	IEA
GO:0009658 [list] [network] chloroplast organization	(194 genes)	IMP
GO:0009611 [list] [network] response to wounding	(212 genes)	IEP
GO:0009751 [list] [network] response to salicylic acid	(215 genes)	IEP
GO:0009753 [list] [network] response to jasmonic acid	(222 genes)	IEP
GO:0009414 [list] [network] response to water deprivation	(361 genes)	IEP
GO:0009409 [list] [network] response to cold	(411 genes)	IEP
GO:0009651 [list] [network] response to salt stress	(485 genes)	IEP IMP
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated	(495 genes)	IDA IMP
GO:0006970 [list] [network] response to osmotic stress	(563 genes)	IEP
GO:0009737 [list] [network] response to abscisic acid	(574 genes)	IEP
GO:0006952 [list] [network] defense response	(1420 genes)	IEA
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IDA ISM

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS TAS
GO:0003677 [list] [network] DNA binding	(2280 genes)	IEA TAS

KEGG

Protein

NP_175008.1

BLAST

NP_175008.1

Orthologous

[Ortholog page] AT2G33710 (ath) AT5G07310 (ath) Rap2.6L (ath) ERF110 (ath) AT5G61890 (ath) LOC4329612 (osa) LOC4332792 (osa) LOC4335707 (osa) LOC4349881 (osa) LOC4351606 (osa) LOC7468768 (ppo) LOC7469237 (ppo) LOC7482822 (ppo) LOC7484341 (ppo) LOC9267785 (osa) LOC9268751 (osa) LOC11405418 (mtr) LOC11421690 (mtr) LOC11434091 (mtr) LOC11438832 (mtr) LOC11443305 (mtr) LOC25495900 (mtr) LOC25496160 (mtr) LOC100245655 (vvi) LOC100250476 (vvi) LOC100262406 (vvi) LOC100264647 (vvi) LOC100266913 (vvi) LOC100275504 (zma) LOC100280929 (zma) LOC100500531 (gma) LOC100777915 (gma) LOC100787091 (gma) LOC100793215 (gma) LOC100793410 (gma) LOC100796247 (gma) LOC100796480 (gma) LOC100796624 (gma) LOC100798671 (gma) LOC100799190 (gma) LOC100802242 (gma) LOC100804843 (gma) LOC100806383 (gma) LOC100816370 (gma) LOC100817436 (gma) ERF84 (sly) LOC101251748 (sly) ERF-J2 (sly) ERF-J1 (sly) ERF-D1 (sly) ERF-D9 (sly) ERF-D2 (sly) ERF-D8 (sly) ERF-D7 (sly) LOC103628663 (zma) LOC103630419 (zma) LOC103642291 (zma) LOC103642747 (zma) LOC103645181 (zma) LOC103646542 (zma) LOC103846580 (bra) LOC103847068 (bra) LOC103850650 (bra) LOC103850861 (bra) LOC103854964 (bra) LOC103856012 (bra) LOC103856843 (bra) LOC103865292 (bra) LOC103867515 (bra) LOC103873458 (bra) LOC107278754 (osa) LOC112938623 (osa)

Subcellular
localization
wolf

nucl 10

(predict for NP_175008.1)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for NP_175008.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with RAP2.6 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.6	AT2G38240	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	818403
7.1	CYP94B3	cytochrome P450, family 94, subfamily B, polypeptide 3	[detail]	824011
6.3	AT5G05600	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	830443
6.2	AT1G10585	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[detail]	837600
5.6	GSTU6	glutathione S-transferase tau 6	[detail]	817493
5.3	ABR1	Integrase-type DNA-binding superfamily protein	[detail]	836596
4.2	ILL5	IAA-amino acid hydrolase ILR1-like 5	[detail]	841604

Coexpressed
gene list

[Coexpressed gene list for RAP2.6]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264415_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264415_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264415_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	840915
Refseq ID (protein)	NP_175008.1

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