[←][→] ath   At1g49560 Gene
functional annotation
Function   Homeodomain-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IEA ISS  
KEGG
Protein NP_001322606.1  NP_564549.1 
BLAST NP_001322606.1  NP_564549.1 
Orthologous [Ortholog page] AT4G37180 (ath)  LOC4334216 (osa)  LOC4342269 (osa)  LOC4352661 (osa)  LOC7483133 (ppo)  LOC7490005 (ppo)  LOC11416542 (mtr)  LOC18097827 (ppo)  LOC18099359 (ppo)  LOC25493035 (mtr)  LOC100785723 (gma)  LOC100794220 (gma)  LOC100803341 (gma)  LOC100806237 (gma)  LOC100809323 (gma)  LOC100812420 (gma)  LOC100817326 (gma)  LOC100873121 (tae)  LOC100873126 (tae)  LOC100873145 (tae)  LOC101243935 (sly)  LOC101255362 (sly)  LOC103835011 (bra)  LOC103862509 (bra)  LOC103864545 (bra)  LOC103868788 (bra)  LOC103871405 (bra)  LOC107276996 (osa)  LOC123052916 (tae)  LOC123102390 (tae)  LOC123113422 (tae)  LOC123119581 (tae)  LOC123122936 (tae)  LOC123188881 (tae)  LOC123398072 (hvu)  LOC123405696 (hvu)  LOC123426316 (hvu)  LOC123452375 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_001322606.1)
nucl 8,  cyto 1  (predict for NP_564549.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001322606.1)
other 8  (predict for NP_564549.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G49560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.1 AT5G47060 hypothetical protein (DUF581) [detail] 834752
5.9 AT1G53035 uncharacterized protein [detail] 841737
5.8 AT5G44730 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 834502
3.5 AT5G46600 aluminum activated malate transporter family protein [detail] 834703
Coexpressed
gene list		 [Coexpressed gene list for AT1G49560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261610_at
261610_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261610_at
261610_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261610_at
261610_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841380      
Refseq ID (protein) NP_001322606.1 
NP_564549.1 


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