[←][→] ath   At1g50440 Gene
functional annotation
Function   RING/FYVE/PHD zinc finger superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
KEGG
Protein NP_001117462.1  NP_001321847.1  NP_001321848.1  NP_564569.1  NP_849790.1 
BLAST NP_001117462.1  NP_001321847.1  NP_001321848.1  NP_564569.1  NP_849790.1 
Orthologous [Ortholog page] LOC4328203 (osa)  LOC7469466 (ppo)  LOC7490849 (ppo)  LOC25488027 (mtr)  LOC100789593 (gma)  LOC100808123 (gma)  LOC101263685 (sly)  LOC103868623 (bra)  LOC123132069 (tae)  LOC123136093 (tae)  LOC123143603 (tae)  LOC123406022 (hvu) 
Subcellular
localization
wolf
cyto 3,  plas 3,  E.R. 3,  E.R._plas 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001117462.1)
cyto 8,  E.R. 2  (predict for NP_001321847.1)
plas 4,  E.R. 3,  cyto_plas 3  (predict for NP_001321848.1)
cyto 3,  plas 3,  E.R. 3,  E.R._plas 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_564569.1)
cyto 3,  plas 3,  E.R. 3,  E.R._plas 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_849790.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001117462.1)
other 9  (predict for NP_001321847.1)
other 9  (predict for NP_001321848.1)
other 9  (predict for NP_564569.1)
other 9  (predict for NP_849790.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT1G50440 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.3 AT3G02460 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 821261
6.2 PP2A serine/threonine protein phosphatase 2A [detail] 843333
6.0 AT1G13460 Protein phosphatase 2A regulatory B subunit family protein [detail] 837906
5.3 VPS22 EAP30/Vps36 family protein [detail] 828812
5.3 AT2G02960 RING/FYVE/PHD zinc finger superfamily protein [detail] 814825
Coexpressed
gene list		 [Coexpressed gene list for AT1G50440]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261852_at
261852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261852_at
261852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261852_at
261852_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841466      
Refseq ID (protein) NP_001117462.1 
NP_001321847.1 
NP_001321848.1 
NP_564569.1 
NP_849790.1 


The preparation time of this page was 0.1 [sec].