[←][→] ath   AT1G50440 Gene
functional annotation
Function   RING/FYVE/PHD zinc finger superfamily protein  
GO BP
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001117462.1  NP_001321847.1  NP_001321848.1  NP_564569.1  NP_849790.1 
BLAST NP_001117462.1  NP_001321847.1  NP_001321848.1  NP_564569.1  NP_849790.1 
Orthologous [Ortholog page] LOC4328203 (osa)  LOC7469466 (ppo)  LOC7490849 (ppo)  LOC25488027 (mtr)  LOC100251272 (vvi)  LOC100285184 (zma)  LOC100789593 (gma)  LOC100808123 (gma)  LOC101263685 (sly)  LOC103868623 (bra) 
Subcellular
localization
wolf
cyto 3,  plas 3,  E.R. 3,  E.R._plas 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001117462.1)
cyto 8,  E.R. 2  (predict for NP_001321847.1)
plas 4,  E.R. 3,  cyto_plas 3  (predict for NP_001321848.1)
cyto 3,  plas 3,  E.R. 3,  E.R._plas 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_564569.1)
cyto 3,  plas 3,  E.R. 3,  E.R._plas 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_849790.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001117462.1)
other 9  (predict for NP_001321847.1)
other 9  (predict for NP_001321848.1)
other 9  (predict for NP_564569.1)
other 9  (predict for NP_849790.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
Genes directly connected with AT1G50440 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT1G13460 Protein phosphatase 2A regulatory B subunit family protein [detail] 837906
6.2 AT3G02460 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 821261
5.2 AT3G59660 C2 domain-containing protein / GRAM domain-containing protein [detail] 825135
4.6 AT2G02960 RING/FYVE/PHD zinc finger superfamily protein [detail] 814825
3.9 AT1G16930 F-box/RNI-like/FBD-like domains-containing protein [detail] 838264
Coexpressed
gene list		 [Coexpressed gene list for AT1G50440]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261852_at
261852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261852_at
261852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261852_at
261852_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841466      
Refseq ID (protein) NP_001117462.1 
NP_001321847.1 
NP_001321848.1 
NP_564569.1 
NP_849790.1 


The preparation time of this page was 0.1 [sec].