[←][→] ath   At1g50600 Gene
functional annotation
Function   scarecrow-like 5    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001323176.1  NP_001323177.1  NP_175475.2 
BLAST NP_001323176.1  NP_001323177.1  NP_175475.2 
Orthologous [Ortholog page] SCL21 (ath)  PAT1 (ath)  LOC4331920 (osa)  LOC4343735 (osa)  LOC4348466 (osa)  LOC7468554 (ppo)  LOC7487530 (ppo)  LOC11418702 (mtr)  LOC100796496 (gma)  LOC100808300 (gma)  LOC101252411 (sly)  LOC101253917 (sly)  LOC103828848 (bra)  LOC103837238 (bra)  PAT1 (bra)  LOC103871334 (bra)  LOC103872411 (bra)  LOC103874930 (bra)  LOC123044417 (tae)  LOC123052274 (tae)  LOC123093152 (tae)  LOC123098425 (tae)  LOC123105201 (tae)  LOC123113478 (tae)  LOC123123002 (tae)  LOC123188130 (tae)  LOC123425543 (hvu)  LOC123449451 (hvu)  LOC123452466 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001323176.1)
chlo 5,  nucl 2,  mito 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001323177.1)
chlo 8,  nucl 1  (predict for NP_175475.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001323176.1)
mito 3  (predict for NP_001323177.1)
chlo 4,  mito 4  (predict for NP_175475.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SCL5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.9 SCL1 SCARECROW-like 1 [detail] 838743
6.6 AT1G67310 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain [detail] 843051
6.3 SCL14 SCARECROW-like 14 [detail] 837267
Coexpressed
gene list		 [Coexpressed gene list for SCL5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261860_at
261860_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261860_at
261860_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261860_at
261860_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841482      
Refseq ID (protein) NP_001323176.1 
NP_001323177.1 
NP_175475.2 


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