[←][→] ath   At1g65040 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0030433 [list] [network] ubiquitin-dependent ERAD pathway  (10 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (155 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (215 genes)
Protein NP_001077774.1  NP_001322004.1  NP_001322005.1  NP_001322006.1  NP_176684.4  NP_849843.3 
BLAST NP_001077774.1  NP_001322004.1  NP_001322005.1  NP_001322006.1  NP_176684.4  NP_849843.3 
Orthologous [Ortholog page] Hrd1A (ath)  LOC4340826 (osa)  LOC7494403 (ppo)  LOC11433721 (mtr)  LOC11441665 (mtr)  LOC18108304 (ppo)  LOC100782356 (gma)  LOC100816441 (gma)  LOC101257051 (sly)  LOC101262220 (sly)  LOC103840247 (bra)  LOC103852213 (bra)  LOC123078088 (tae)  LOC123150421 (tae)  LOC123155978 (tae)  LOC123165296 (tae)  LOC123407184 (hvu) 
Subcellular
localization
wolf
plas 4,  vacu 3,  chlo 1,  E.R. 1  (predict for NP_001077774.1)
plas 6,  vacu 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001322004.1)
chlo 4,  E.R. 4,  mito 1  (predict for NP_001322005.1)
chlo 4,  nucl 1,  mito 1,  cyto 1,  extr 1,  vacu 1,  E.R. 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001322006.1)
chlo 3,  extr 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_176684.4)
plas 6,  vacu 2,  chlo 1,  E.R. 1,  golg 1  (predict for NP_849843.3)
Subcellular
localization
TargetP
scret 5  (predict for NP_001077774.1)
scret 9  (predict for NP_001322004.1)
other 9,  mito 4  (predict for NP_001322005.1)
other 7,  mito 4  (predict for NP_001322006.1)
scret 8,  other 6  (predict for NP_176684.4)
scret 9  (predict for NP_849843.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 14
ath03060 Protein export 3
ath04145 Phagosome 3
Genes directly connected with Hrd1B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.8 UTR1 UDP-galactose transporter 1 [detail] 814811
11.8 ATERDJ3B DNAJ heat shock family protein [detail] 825434
11.6 PDIL2-2 PDI-like 2-2 [detail] 839355
Coexpressed
gene list		 [Coexpressed gene list for Hrd1B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261904_at
261904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261904_at
261904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261904_at
261904_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842812      
Refseq ID (protein) NP_001077774.1 
NP_001322004.1 
NP_001322005.1 
NP_001322006.1 
NP_176684.4 
NP_849843.3 


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