[←][→] ath   At1g72050 Gene
functional annotation
Function   transcription factor IIIA    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0080084 [list] [network] 5S rDNA binding  (1 genes)  IDA  
GO:0008097 [list] [network] 5S rRNA binding  (3 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA  
KEGG
Protein NP_001322778.1  NP_001322779.1  NP_565033.1  NP_974128.1 
BLAST NP_001322778.1  NP_001322779.1  NP_565033.1  NP_974128.1 
Orthologous [Ortholog page] LOC4328076 (osa)  LOC4337652 (osa)  LOC7475788 (ppo)  LOC11444101 (mtr)  LOC18104416 (ppo)  TFIIIA (sly)  LOC100800196 (gma)  LOC100801812 (gma)  LOC103830815 (bra)  LOC103852749 (bra)  LOC120580532 (mtr)  LOC120580533 (mtr)  LOC123106942 (tae)  LOC123131751 (tae)  LOC123135615 (tae)  LOC123143194 (tae)  LOC123180142 (tae)  LOC123188412 (tae)  LOC123398959 (hvu)  LOC123401189 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001322778.1)
nucl 8,  plas 1,  vacu 1,  pero 1  (predict for NP_001322779.1)
nucl 5,  cyto 2,  pero 1,  cyto_plas 1  (predict for NP_565033.1)
nucl 7,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_974128.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001322778.1)
other 9  (predict for NP_001322779.1)
other 6  (predict for NP_565033.1)
other 9  (predict for NP_974128.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03018 RNA degradation 3
Genes directly connected with TFIIIA on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 AT2G40430 Nop53 protein [detail] 818636
6.7 SDN3 small RNA degrading nuclease 3 [detail] 836859
6.5 AT5G17510 mediator of RNA polymerase II transcription subunit-like protein [detail] 831617
6.4 AT1G73490 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 843684
5.1 AT4G16141 GATA type zinc finger transcription factor family protein [detail] 827301
4.9 AT5G52070 Agenet domain-containing protein [detail] 835283
Coexpressed
gene list		 [Coexpressed gene list for TFIIIA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256344_at
256344_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256344_at
256344_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256344_at
256344_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843536      
Refseq ID (protein) NP_001322778.1 
NP_001322779.1 
NP_565033.1 
NP_974128.1 


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