ATTED-II : GeneID search result

[←][→] ath AT1G76580 Gene

functional annotation

Function

Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein

GO BP

GO:0006355 [list] [network] regulation of transcription, DNA-templated

(1984 genes)

TAS

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	IEA ISM

GO MF

GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_001319389.1 NP_001322692.1 NP_001322693.1

BLAST

NP_001319389.1 NP_001322692.1 NP_001322693.1

Orthologous

[Ortholog page] SPL14 (ath) LOC4346023 (osa) LOC7474540 (ppo) LOC11419827 (mtr) LOC100240978 (vvi) LOC100812180 (gma) LOC100819004 (gma) sbp16 (zma) sbp7 (zma) LOC103832120 (bra) LOC103853034 (bra) LOC103872891 (bra)

Subcellular
localization
wolf

nucl 6, chlo 2, cyto 1, plas 1, cyto_plas 1	(predict for NP_001319389.1)
nucl 10	(predict for NP_001322692.1)
nucl 10	(predict for NP_001322693.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001319389.1)
other 7	(predict for NP_001322692.1)
other 7	(predict for NP_001322693.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

Genes directly connected with AT1G76580 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.4	PUB45	plant U-box 45	[detail]	839684
5.3	SPPL4	SIGNAL PEPTIDE PEPTIDASE-LIKE 4	[detail]	839499
5.3	AT2G47410	WD40 domain-containing protein	[detail]	819354

Coexpressed
gene list

[Coexpressed gene list for AT1G76580]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

259971_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

259971_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

259971_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	843991
Refseq ID (protein)	NP_001319389.1
	NP_001322692.1
	NP_001322693.1

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