[←][→] ath   At2g04890 Gene
functional annotation
Function   SCARECROW-like 21    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_178566.1 
BLAST NP_178566.1 
Orthologous [Ortholog page] PAT1 (ath)  SCL5 (ath)  LOC4331920 (osa)  LOC4343735 (osa)  LOC4348466 (osa)  LOC7468554 (ppo)  LOC7487530 (ppo)  LOC11418702 (mtr)  LOC100796496 (gma)  LOC100808300 (gma)  LOC101252411 (sly)  LOC101253917 (sly)  LOC103828848 (bra)  LOC103837238 (bra)  PAT1 (bra)  LOC103871334 (bra)  LOC103872411 (bra)  LOC103874930 (bra)  LOC123044417 (tae)  LOC123052274 (tae)  LOC123093152 (tae)  LOC123098425 (tae)  LOC123105201 (tae)  LOC123113478 (tae)  LOC123123002 (tae)  LOC123188130 (tae)  LOC123425543 (hvu)  LOC123449451 (hvu)  LOC123452466 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  cysk 1,  nucl_plas 1  (predict for NP_178566.1)
Subcellular
localization
TargetP
other 9  (predict for NP_178566.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SCL21 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 MBD02 methyl-CPG-binding domain protein 02 [detail] 833487
7.0 AT5G19150 pfkB-like carbohydrate kinase family protein [detail] 832035
6.2 AT5G66180 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 836750
4.9 ALS3 aluminum sensitive 3 [detail] 818310
4.7 CYP705A21 cytochrome P450, family 705, subfamily A, polypeptide 21 [detail] 821555
Coexpressed
gene list		 [Coexpressed gene list for SCL21]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263633_at
263633_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263633_at
263633_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263633_at
263633_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 815036      
Refseq ID (protein) NP_178566.1 


The preparation time of this page was 0.1 [sec].