[←][→] ath   AT2G04890 Gene
functional annotation
Function   SCARECROW-like 21  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IBA ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_178566.1 
BLAST NP_178566.1 
Orthologous [Ortholog page] PAT1 (ath)  SCL5 (ath)  LOC4331920 (osa)  LOC4343735 (osa)  LOC4348466 (osa)  LOC7468554 (ppo)  LOC7487530 (ppo)  LOC11418702 (mtr)  LOC100250258 (vvi)  LOC100261403 (vvi)  LOC100281447 (zma)  LOC100383464 (zma)  LOC100384069 (zma)  LOC100502252 (zma)  LOC100796496 (gma)  LOC100808300 (gma)  LOC101252411 (sly)  LOC101253917 (sly)  LOC103828848 (bra)  LOC103837238 (bra)  PAT1 (bra)  LOC103871334 (bra)  LOC103872411 (bra)  LOC103874930 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  cysk 1,  nucl_plas 1  (predict for NP_178566.1)
Subcellular
localization
TargetP
other 9  (predict for NP_178566.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with SCL21 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT5G66180 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 836750
7.0 MBD02 methyl-CPG-binding domain protein 02 [detail] 833487
6.5 AT5G05480 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [detail] 830431
5.7 AT2G13840 Polymerase/histidinol phosphatase-like protein [detail] 815867
Coexpressed
gene list		 [Coexpressed gene list for SCL21]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263633_at
263633_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263633_at
263633_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263633_at
263633_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 815036      
Refseq ID (protein) NP_178566.1 


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