[←][→] ath   At2g24790 Gene
functional annotation
Function   CONSTANS-like 3      
GO BP
GO:0010161 [list] [network] red light signaling pathway  (10 genes)  IMP  
GO:0010099 [list] [network] regulation of photomorphogenesis  (39 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0043565 [list] [network] sequence-specific DNA binding  (890 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_180052.1  NP_973530.1 
BLAST NP_180052.1  NP_973530.1 
Orthologous [Ortholog page] COL4 (ath)  COL5 (ath)  LOC4329950 (osa)  LOC4336288 (osa)  LOC7461603 (ppo)  LOC7465448 (ppo)  LOC7489120 (ppo)  LOC7489168 (ppo)  LOC11425462 (mtr)  LOC11431452 (mtr)  LOC11431470 (mtr)  LOC100191137 (sly)  COL10 (gma)  LOC100794431 (gma)  LOC100802376 (gma)  LOC100804201 (gma)  COL8 (gma)  LOC101254368 (sly)  LOC101268413 (sly)  LOC103249145 (bra)  LOC103837073 (bra)  LOC103845200 (bra)  LOC103864587 (bra)  LOC103874359 (bra)  LOC123045911 (tae)  LOC123053778 (tae)  LOC123127672 (tae)  LOC123137439 (tae)  LOC123144785 (tae)  LOC123189661 (tae)  LOC123403770 (hvu)  LOC123427128 (hvu) 
Subcellular
localization
wolf
chlo 5,  mito 2,  cyto 1,  vacu 1  (predict for NP_180052.1)
chlo 5,  mito 1,  vacu 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_973530.1)
Subcellular
localization
TargetP
scret 4,  other 3  (predict for NP_180052.1)
scret 4,  other 3  (predict for NP_973530.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00196 Photosynthesis - antenna proteins 2
Genes directly connected with COL3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.0 COL4 zinc finger CONSTANS-like protein [detail] 832563
4.8 AT2G35260 CAAX protease self-immunity protein [detail] 818093
4.8 AT4G24370 uncharacterized protein [detail] 828539
Coexpressed
gene list		 [Coexpressed gene list for COL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263537_at
263537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263537_at
263537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263537_at
263537_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817016      
Refseq ID (protein) NP_180052.1 
NP_973530.1 


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