[←][→] ath   At3g06380 Gene
functional annotation
Function   tubby-like protein 9    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001326702.1  NP_187289.1 
BLAST NP_001326702.1  NP_187289.1 
Orthologous [Ortholog page] TLP11 (ath)  LOC103845812 (bra)  LOC103854476 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  golg_plas 1  (predict for NP_001326702.1)
mito 4,  nucl 3,  chlo 1,  cyto 1,  cysk 1,  golg_plas 1  (predict for NP_187289.1)
Subcellular
localization
TargetP
mito 8,  other 4  (predict for NP_001326702.1)
mito 7  (predict for NP_187289.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TLP9 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.3 AT1G24440 RING/U-box superfamily protein [detail] 839060
6.0 AT3G52060 core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [detail] 824369
5.8 AKINBETA1 5'-AMP-activated protein kinase beta-2 subunit protein [detail] 832243
5.6 AT3G61180 RING/U-box superfamily protein [detail] 825290
5.4 AT2G27480 Calcium-binding EF-hand family protein [detail] 817293
4.0 CBSX5 Cystathionine beta-synthase (CBS) family protein [detail] 828855
Coexpressed
gene list		 [Coexpressed gene list for TLP9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258906_at
258906_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258906_at
258906_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258906_at
258906_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819812      
Refseq ID (protein) NP_001326702.1 
NP_187289.1 


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