ATTED-II : GeneID search result

[←][→] ath AT3G13540 Gene

functional annotation

Function

myb domain protein 5

GO BP

GO:0048354 [list] [network] mucilage biosynthetic process involved in seed coat development	(14 genes)	IMP
GO:0010214 [list] [network] seed coat development	(44 genes)	IMP
GO:0010090 [list] [network] trichome morphogenesis	(62 genes)	IMP
GO:0010026 [list] [network] trichome differentiation	(83 genes)	NAS
GO:0009845 [list] [network] seed germination	(93 genes)	NAS
GO:0030154 [list] [network] cell differentiation	(695 genes)	IBA
GO:0010468 [list] [network] regulation of gene expression	(2484 genes)	IEP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA ISM

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IBA
GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IBA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	IBA ISS
GO:0003677 [list] [network] DNA binding	(2280 genes)	TAS

KEGG

Protein

NP_187963.1

BLAST

NP_187963.1

Orthologous

[Ortholog page] LOC541744 (zma) LOC541754 (zma) THM27 (sly) MYB54 (gma) MYB48 (gma) MYB56 (gma) MYBZ2 (gma) MYB7 (ath) MYB6 (ath) MYB32 (ath) MYB4 (ath) HOS10 (ath) LOC4323897 (osa) LOC4323911 (osa) LOC4324770 (osa) LOC4346246 (osa) LOC4349938 (osa) LOC7453642 (ppo) LOC7463575 (ppo) LOC7487152 (ppo) LOC7489662 (ppo) LOC7494250 (ppo) LOC7497505 (ppo) LOC9266213 (osa) LOC9271088 (osa) LOC9272091 (osa) LOC11427010 (mtr) LOC11442816 (mtr) LOC25489890 (mtr) LOC25490340 (mtr) LOC100037768 (zma) LOC100101513 (zma) LOC100125635 (zma) LOC100193234 (zma) LOC100232973 (vvi) MYBCS1 (vvi) MYB4A (vvi) MYB4B (vvi) LOC100254642 (vvi) LOC100259749 (vvi) LOC100261376 (vvi) LOC100279722 (zma) MYB047 (gma) LOC100384757 (zma) W2 (gma) LOC100797847 (gma) LOC100808083 (gma) LOC101243923 (sly) LOC101251314 (sly) LOC101263944 (sly) LOC103636205 (zma) LOC103643223 (zma) LOC103828091 (bra) LOC103832978 (bra) LOC103835174 (bra) LOC103849769 (bra) LOC103858520 (bra) LOC103860474 (bra) LOC103862384 (bra) LOC103870122 (bra)

Subcellular
localization
wolf

nucl 6, cyto_nucl 4, chlo 1, cyto 1, chlo_mito 1

(predict for NP_187963.1)

Subcellular
localization
TargetP

other 8

(predict for NP_187963.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for MYB5]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256985_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256985_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256985_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	820556
Refseq ID (protein)	NP_187963.1

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