[←][→] ath   At3g46640 Gene
functional annotation
Function   Homeodomain-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0042753 [list] [network] positive regulation of circadian rhythm  (12 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO:0010468 [list] [network] regulation of gene expression  (2177 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_001030823.1  NP_001319698.1  NP_190248.1 
BLAST NP_001030823.1  NP_001319698.1  NP_190248.1 
Orthologous [Ortholog page] BOA (ath)  LOC4326391 (osa)  LOC7465095 (ppo)  LOC7468625 (ppo)  LOC11427644 (mtr)  LUXC (gma)  LUXB (gma)  PCL1 (sly)  LOC103873296 (bra)  LOC103873783 (bra)  LOC113002614 (sly)  LOC123063675 (tae)  LOC123072822 (tae)  LOC123080986 (tae)  LOC123441160 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001030823.1)
nucl 9  (predict for NP_001319698.1)
nucl 9  (predict for NP_190248.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001030823.1)
other 9  (predict for NP_001319698.1)
other 9  (predict for NP_190248.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
Genes directly connected with PCL1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.0 BBX8 B-box type zinc finger protein with CCT domain-containing protein [detail] 834878
9.6 TOC1 CCT motif -containing response regulator protein [detail] 836259
8.8 AT4G33980 uncharacterized protein [detail] 829544
7.6 DREB2C Integrase-type DNA-binding superfamily protein [detail] 818627
7.0 BOA Homeodomain-like superfamily protein [detail] 836076
6.1 AT3G59350 Protein kinase superfamily protein [detail] 825104
4.5 CRF4 cytokinin response factor 4 [detail] 828908
Coexpressed
gene list		 [Coexpressed gene list for PCL1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 823817      
Refseq ID (protein) NP_001030823.1 
NP_001319698.1 
NP_190248.1 


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