[←][→] ath   At3g54810 Gene
functional annotation
Function   Plant-specific GATA-type zinc finger transcription factor family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009845 [list] [network] seed germination  (99 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_191041.1  NP_850704.1 
BLAST NP_191041.1  NP_850704.1 
Orthologous [Ortholog page] LOC7458664 (ppo)  LOC7494950 (ppo)  LOC11405393 (mtr)  LOC11424677 (mtr)  LOC100783228 (gma)  LOC100792644 (gma)  LOC100815693 (gma)  LOC100816641 (gma)  LOC101250294 (sly)  LOC101251289 (sly)  LOC103829992 (bra)  LOC103841382 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_191041.1)
nucl 10  (predict for NP_850704.1)
Subcellular
localization
TargetP
other 8  (predict for NP_191041.1)
other 8  (predict for NP_850704.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with BME3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.7 EXO Phosphate-responsive 1 family protein [detail] 826473
9.6 AT3G19680 hypothetical protein (DUF1005) [detail] 821505
7.5 GAE1 UDP-D-glucuronate 4-epimerase 1 [detail] 829167
7.2 AT2G44500 O-fucosyltransferase family protein [detail] 819057
7.0 GPAT3 glycerol-3-phosphate acyltransferase 3 [detail] 827165
6.6 AT1G61260 cotton fiber (DUF761) [detail] 842420
6.4 CSLC04 Cellulose-synthase-like C4 [detail] 822444
5.3 AT2G39870 uncharacterized protein [detail] 818574
Coexpressed
gene list		 [Coexpressed gene list for BME3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251861_at
251861_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251861_at
251861_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251861_at
251861_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824646      
Refseq ID (protein) NP_191041.1 
NP_850704.1 


The preparation time of this page was 0.2 [sec].