[←][→] ath   At4g00180 Gene
functional annotation
Function   Plant-specific transcription factor YABBY family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010158 [list] [network] abaxial cell fate specification  (10 genes)  IGI  
GO:1902183 [list] [network] regulation of shoot apical meristem development  (10 genes)  IMP  
GO:2000024 [list] [network] regulation of leaf development  (22 genes)  IMP  
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis  (23 genes)  IMP  
GO:0010154 [list] [network] fruit development  (1349 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001078337.1  NP_567154.1 
BLAST NP_001078337.1  NP_567154.1 
Orthologous
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for NP_001078337.1)
nucl 10  (predict for NP_567154.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_001078337.1)
chlo 5,  other 4  (predict for NP_567154.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with YAB3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.5 AFO Plant-specific transcription factor YABBY family protein [detail] 819127
8.8 YAB5 plant-specific transcription factor YABBY family protein [detail] 817199
8.3 HB25 homeobox protein 25 [detail] 836666
7.8 YAB2 Plant-specific transcription factor YABBY family protein [detail] 3766682
6.9 iqd21 IQ-domain 21 [detail] 824087
6.4 AT4G17810 C2H2 and C2HC zinc fingers superfamily protein [detail] 827503
4.9 AT3G61700 helicase with zinc finger protein [detail] 825343
4.6 BLH2 BEL1-like homeodomain 2 [detail] 829840
4.3 WOX1 WUSCHEL related homeobox 1 [detail] 821325
Coexpressed
gene list		 [Coexpressed gene list for YAB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255709_at
255709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255709_at
255709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255709_at
255709_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827914      
Refseq ID (protein) NP_001078337.1 
NP_567154.1 


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