[←][→] ath   At4g17230 Gene
functional annotation
Function   SCARECROW-like 13    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0009408 [list] [network] response to heat  (287 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_001328648.1  NP_193456.4 
BLAST NP_001328648.1  NP_193456.4 
Orthologous [Ortholog page] LOC7455815 (ppo)  LOC7463692 (ppo)  LOC11439575 (mtr)  GRAS1 (sly)  LOC100776109 (gma)  LOC100792931 (gma)  LOC100817987 (gma)  LOC100819190 (gma)  LOC101247427 (sly)  LOC101260037 (sly)  LOC103833999 (bra)  LOC103868300 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001328648.1)
nucl 6,  chlo 4  (predict for NP_193456.4)
Subcellular
localization
TargetP
other 5  (predict for NP_001328648.1)
other 5  (predict for NP_193456.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
Genes directly connected with SCL13 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 CPK28 calcium-dependent protein kinase 28 [detail] 836753
8.1 CAD1 MAC/Perforin domain-containing protein [detail] 839846
7.9 EXO70B1 exocyst subunit exo70 family protein B1 [detail] 835956
7.5 AT3G09830 Protein kinase superfamily protein [detail] 820141
6.1 PEPR1 PEP1 receptor 1 [detail] 843639
5.4 RSH2 RELA/SPOT homolog 2 [detail] 820619
Coexpressed
gene list		 [Coexpressed gene list for SCL13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245247_at
245247_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245247_at
245247_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245247_at
245247_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827435      
Refseq ID (protein) NP_001328648.1 
NP_193456.4 


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