[←][→] ath   At4g21550 Gene
functional annotation
Function   VP1/ABI3-like 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048366 [list] [network] leaf development  (465 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IEA ISS  
KEGG
Protein NP_001320023.1  NP_001329314.1  NP_193886.3 
BLAST NP_001320023.1  NP_001329314.1  NP_193886.3 
Orthologous [Ortholog page] LOC4343608 (osa)  LOC7490792 (ppo)  LOC11434350 (mtr)  LOC18102973 (ppo)  LOC100782114 (gma)  LOC100807252 (gma)  LOC101256546 (sly)  LOC103859136 (bra)  LOC123044544 (tae)  LOC123052404 (tae)  LOC123188256 (tae)  LOC123425690 (hvu) 
Subcellular
localization
wolf
nucl 9,  mito 1,  cysk 1  (predict for NP_001320023.1)
nucl 6,  cyto 1,  mito 1  (predict for NP_001329314.1)
nucl 5,  chlo 1,  plas 1,  mito 1,  extr 1,  golg 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_193886.3)
Subcellular
localization
TargetP
chlo 4,  scret 3  (predict for NP_001320023.1)
chlo 4,  scret 3  (predict for NP_001329314.1)
chlo 4,  scret 3  (predict for NP_193886.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath03018 RNA degradation 2
Genes directly connected with VAL3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
4.2 AT1G77600 ARM repeat superfamily protein [detail] 844095
4.1 ABCG13 ABC-2 type transporter family protein [detail] 841571
4.1 AT5G10080 Eukaryotic aspartyl protease family protein [detail] 830872
3.6 AT4G11990 Cell cycle regulated microtubule associated protein [detail] 826806
Coexpressed
gene list		 [Coexpressed gene list for VAL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254421_at
254421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254421_at
254421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254421_at
254421_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828240      
Refseq ID (protein) NP_001320023.1 
NP_001329314.1 
NP_193886.3 


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