[←][→] ath   At4g33940 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IEA  
KEGG
Protein NP_001329714.1  NP_567943.1 
BLAST NP_001329714.1  NP_567943.1 
Orthologous [Ortholog page] LOC101249497 (sly)  LOC103843481 (bra)  LOC103862307 (bra) 
Subcellular
localization
wolf
cyto 8,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001329714.1)
cyto 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_567943.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001329714.1)
other 6  (predict for NP_567943.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT4G33940 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.5 VPS2.1 SNF7 family protein [detail] 815211
7.3 VPS60.1 SNF7 family protein [detail] 820233
7.3 CHIP carboxyl terminus of HSC70-interacting protein [detail] 819925
6.6 AT1G70590 F-box family protein [detail] 843396
5.0 SAG20 senescence associated gene 20 [detail] 2745879
Coexpressed
gene list		 [Coexpressed gene list for AT4G33940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253324_at
253324_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253324_at
253324_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253324_at
253324_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829539      
Refseq ID (protein) NP_001329714.1 
NP_567943.1 


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