[][] ath   AT4G37130 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein family protein
GO BP
GO:0051028 [list] [network] mRNA transport  (63 genes)  IEA  
GO:0006913 [list] [network] nucleocytoplasmic transport  (95 genes)  IEA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (52 genes)  IBA  
GO:0005635 [list] [network] nuclear envelope  (121 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008139 [list] [network] nuclear localization sequence binding  (20 genes)  IBA  
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_195430.2 
BLAST NP_195430.2 
Orthologous [Ortholog page] LOC4347240 (osa)LOC7477983 (ppo)LOC11413486 (mtr)LOC100194061 (zma)LOC100253561 (vvi)LOC100282882 (zma)LOC100776992 (gma)LOC100805204 (gma)LOC100855059 (vvi)LOC101255050 (sly)LOC103835013 (bra)LOC103864202 (bra)
Subcellular
localization
wolf
nucl 10  (predict for NP_195430.2)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for NP_195430.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT4G37130 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.7 TAF12 TBP-associated factor 12 [detail] 820168
7.6 SR45 arginine/serine-rich 45 [detail] 838230
7.5 ELF5 proline-rich family protein [detail] 836385
7.1 AT5G02850 hydroxyproline-rich glycoprotein family protein [detail] 831762
5.8 DCP5-L decapping 5-like protein [detail] 834569
Coexpressed
gene list
[Coexpressed gene list for AT4G37130]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246240_at
246240_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246240_at
246240_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
246240_at
246240_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 829867    
Refseq ID (protein) NP_195430.2 


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