[←][→] ath   At5g05610 Gene
functional annotation
Function   alfin-like 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006325 [list] [network] chromatin organization  (210 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0035064 [list] [network] methylated histone binding  (21 genes)  IDA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
KEGG
Protein NP_196180.1  NP_850775.1 
BLAST NP_196180.1  NP_850775.1 
Orthologous [Ortholog page] LOC543925 (sly)  AL2 (ath)  LOC4337899 (osa)  LOC4342784 (osa)  LOC7466074 (ppo)  LOC7487323 (ppo)  LOC7490325 (ppo)  LOC7494499 (ppo)  LOC25491446 (mtr)  LOC25498754 (mtr)  LOC100779170 (gma)  LOC100782478 (gma)  LOC100784077 (gma)  LOC100793126 (gma)  LOC100817101 (gma)  LOC100819621 (gma)  LOC101249220 (sly)  LOC101251316 (sly)  LOC101262577 (sly)  LOC103846903 (bra)  LOC103847049 (bra)  LOC103859382 (bra)  LOC103870369 (bra)  LOC123039588 (tae)  LOC123105641 (tae)  LOC123113864 (tae)  LOC123113963 (tae)  LOC123123460 (tae)  LOC123180625 (tae)  LOC123426080 (hvu)  LOC123426411 (hvu)  LOC123453008 (hvu) 
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  chlo 3  (predict for NP_196180.1)
nucl 6,  nucl_plas 4,  chlo 3  (predict for NP_850775.1)
Subcellular
localization
TargetP
other 8  (predict for NP_196180.1)
other 8  (predict for NP_850775.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AL1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.1 AL7 alfin-like 7 [detail] 838013
5.0 AT3G56750 plant/protein [detail] 824842
5.0 EBS PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein [detail] 828303
Coexpressed
gene list		 [Coexpressed gene list for AL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250791_at
250791_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250791_at
250791_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250791_at
250791_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830444      
Refseq ID (protein) NP_196180.1 
NP_850775.1 


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