[←][→] ath   AT5G16540 Gene
functional annotation
Function   zinc finger nuclease 3  
GO BP
GO:0090305 [list] [network] nucleic acid phosphodiester bond hydrolysis  (71 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0004518 [list] [network] nuclease activity  (252 genes)  TAS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  TAS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001330309.1  NP_568332.2  NP_851041.1  NP_974790.1 
BLAST NP_001330309.1  NP_568332.2  NP_851041.1  NP_974790.1 
Orthologous [Ortholog page] ZFN1 (ath)  LOC4324354 (osa)  LOC4350492 (osa)  LOC4352041 (osa)  LOC11410286 (mtr)  LOC100191923 (zma)  LOC100194377 (zma)  LOC100254791 (vvi)  LOC100273243 (zma)  LOC100283646 (zma)  LOC100785411 (gma)  LOC100786261 (gma)  LOC100790771 (gma)  LOC100802536 (gma)  LOC101255551 (sly)  LOC103843613 (bra)  LOC103858986 (bra)  LOC103870889 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  plas 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001330309.1)
nucl 9,  chlo 1,  extr 1  (predict for NP_568332.2)
nucl 7,  extr 1,  chlo 1,  vacu 1  (predict for NP_851041.1)
nucl 9,  chlo 1,  vacu 1  (predict for NP_974790.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001330309.1)
other 8  (predict for NP_568332.2)
other 8  (predict for NP_851041.1)
other 9  (predict for NP_974790.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
ath00052 Galactose metabolism 2
ath00230 Purine metabolism 2
ath00500 Starch and sucrose metabolism 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
Genes directly connected with ZFN3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 ZFN1 zinc finger protein 1 [detail] 821230
6.4 IREG3 iron-regulated protein 3 [detail] 832740
5.5 AT4G19985 Acyl-CoA N-acyltransferases (NAT) superfamily protein [detail] 827743
4.9 AT2G44090 Ankyrin repeat family protein [detail] 819015
Coexpressed
gene list		 [Coexpressed gene list for ZFN3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250128_at
250128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250128_at
250128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250128_at
250128_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831516      
Refseq ID (protein) NP_001330309.1 
NP_568332.2 
NP_851041.1 
NP_974790.1 


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