[←][→] ath   At5g16540 Gene
functional annotation
Function   zinc finger nuclease 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0090305 [list] [network] nucleic acid phosphodiester bond hydrolysis  (46 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004518 [list] [network] nuclease activity  (160 genes)  TAS  
GO:0003677 [list] [network] DNA binding  (1277 genes)  TAS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_001330309.1  NP_568332.2  NP_851041.1  NP_974790.1 
BLAST NP_001330309.1  NP_568332.2  NP_851041.1  NP_974790.1 
Orthologous [Ortholog page] ZFN1 (ath)  LOC4324354 (osa)  LOC4350492 (osa)  LOC4352041 (osa)  LOC7491104 (ppo)  LOC11410286 (mtr)  LOC18104241 (ppo)  LOC100785411 (gma)  LOC100786261 (gma)  LOC100790771 (gma)  LOC100802536 (gma)  LOC101255551 (sly)  LOC103843613 (bra)  LOC103858986 (bra)  LOC103870889 (bra)  LOC123063070 (tae)  LOC123071964 (tae)  LOC123080269 (tae)  LOC123445209 (hvu)  LOC123451971 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  plas 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001330309.1)
nucl 9,  chlo 1,  extr 1  (predict for NP_568332.2)
nucl 7,  extr 1,  chlo 1,  vacu 1  (predict for NP_851041.1)
nucl 9,  chlo 1,  vacu 1  (predict for NP_974790.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001330309.1)
other 8  (predict for NP_568332.2)
other 8  (predict for NP_851041.1)
other 9  (predict for NP_974790.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ZFN3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.1 ZFN1 zinc finger protein 1 [detail] 821230
6.5 IREG3 iron-regulated protein 3 [detail] 832740
5.8 AT1G44000 STAY-GREEN-like protein [detail] 841000
Coexpressed
gene list		 [Coexpressed gene list for ZFN3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250128_at
250128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250128_at
250128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250128_at
250128_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831516      
Refseq ID (protein) NP_001330309.1 
NP_568332.2 
NP_851041.1 
NP_974790.1 


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