[][] ath   AT5G20220 Gene
functional annotation
Function   zinc knuckle (CCHC-type) family protein
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001078608.1  NP_001330527.1  NP_001330528.1  NP_568393.1 
BLAST NP_001078608.1  NP_001330527.1  NP_001330528.1  NP_568393.1 
Orthologous [Ortholog page] LOC4325947 (osa)LOC7459042 (ppo)LOC25502759 (mtr)LOC100217244 (zma)LOC100258796 (vvi)LOC100800156 (gma)LOC101258258 (sly)LOC103845699 (bra)
Subcellular
localization
wolf
nucl 4,  mito 4,  chlo 1  (predict for NP_001078608.1)
mito 4,  chlo 3,  nucl 3  (predict for NP_001330527.1)
chlo 6,  nucl 4  (predict for NP_001330528.1)
nucl 4,  mito 4,  chlo 1  (predict for NP_568393.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for NP_001078608.1)
mito 5,  chlo 3  (predict for NP_001330527.1)
mito 7,  chlo 7  (predict for NP_001330528.1)
mito 5,  chlo 3  (predict for NP_568393.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G20220 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.8 AT1G71810 Protein kinase superfamily protein [detail] 843511
5.7 AT1G76570 Chlorophyll A-B binding family protein [detail] 843990
5.6 AT5G08720 polyketide cyclase/dehydrase/lipid transporter [detail] 830772
5.2 AT3G01210 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 821275
5.2 AT5G52030 TraB family protein [detail] 835278
Coexpressed
gene list
[Coexpressed gene list for AT5G20220]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246069_at
246069_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246069_at
246069_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
246069_at
246069_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 832144    
Refseq ID (protein) NP_001078608.1 
NP_001330527.1 
NP_001330528.1 
NP_568393.1 


The preparation time of this page was 0.2 [sec].