| functional annotation |
| Function |
TCV-interacting protein |
|
| GO BP |
|
GO:0002230 [list] [network] positive regulation of defense response to virus by host
|
(5 genes)
|
IDA
IMP
|
 |
|
GO:0002237 [list] [network] response to molecule of bacterial origin
|
(34 genes)
|
IEP
|
|
|
GO:0051607 [list] [network] defense response to virus
|
(44 genes)
|
IEA
IPI
|
|
|
GO:0016032 [list] [network] viral process
|
(63 genes)
|
IMP
|
|
|
GO:0009615 [list] [network] response to virus
|
(81 genes)
|
IEP
|
|
|
GO:0071456 [list] [network] cellular response to hypoxia
|
(238 genes)
|
HEP
|
|
|
GO:0006355 [list] [network] regulation of transcription, DNA-templated
|
(1984 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0012505 [list] [network] endomembrane system
|
(2531 genes)
|
IEA
|
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
|
GO:0005634 [list] [network] nucleus
|
(10793 genes)
|
IDA
ISM
|
|
|
| GO MF |
|
GO:0003713 [list] [network] transcription coactivator activity
|
(36 genes)
|
IDA
|
|
|
GO:0044212 [list] [network] transcription regulatory region DNA binding
|
(871 genes)
|
IPI
|
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
IDA
ISS
|
|
|
GO:0003677 [list] [network] DNA binding
|
(2280 genes)
|
IDA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_197847.3
|
| BLAST |
NP_197847.3
|
| Orthologous |
[Ortholog page]
NAC062 (ath)
NTL9 (ath)
LOC7496453 (ppo)
LOC11411939 (mtr)
LOC11418502 (mtr)
LOC11423667 (mtr)
NAC22 (gma)
LOC100255616 (vvi)
NAC021 (gma)
LOC100778903 (gma)
LOC100808469 (gma)
NACMTF2 (sly)
NACMTF3 (sly)
LOC103837065 (bra)
LOC103873053 (bra)
LOC103873485 (bra)
LOC103874324 (bra)
LOC109124092 (vvi)
|
Subcellular
localization
wolf |
|
nucl 4,
cyto 2,
plas 1,
cysk_nucl 1,
E.R._plas 1
|
(predict for NP_197847.3)
|
|
Subcellular
localization
TargetP |
|
other 7
|
(predict for NP_197847.3)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with TIP on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 15.8 |
NAC062 |
NAC domain containing protein 62 |
[detail] |
824115 |
| 9.7 |
EXO70B1 |
exocyst subunit exo70 family protein B1 |
[detail] |
835956 |
| 8.7 |
AT3G19240 |
Vacuolar import/degradation, Vid27-related protein |
[detail] |
821458 |
| 8.3 |
AT4G33920 |
Protein phosphatase 2C family protein |
[detail] |
829536 |
| 7.4 |
AT3G62260 |
Protein phosphatase 2C family protein |
[detail] |
825399 |
| 6.0 |
ACR7 |
ACT domain repeat 7 |
[detail] |
828377 |
| 5.0 |
AT3G54000 |
TIP41-like protein |
[detail] |
824567 |
| 4.8 |
AT5G39785 |
hypothetical protein (DUF1666) |
[detail] |
833974 |
|
Coexpressed
gene list |
[Coexpressed gene list for TIP]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
249746_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
249746_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
249746_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G24590 Gene
