[←][→] ath   At5g24930 Gene
functional annotation
Function   zinc finger CONSTANS-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0032922 [list] [network] circadian regulation of gene expression  (9 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0016607 [list] [network] nuclear speck  (50 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_197875.3 
BLAST NP_197875.3 
Orthologous [Ortholog page] COL3 (ath)  COL5 (ath)  LOC4329950 (osa)  LOC4336288 (osa)  LOC7461603 (ppo)  LOC7465448 (ppo)  LOC7489120 (ppo)  LOC7489168 (ppo)  LOC11425462 (mtr)  LOC11431452 (mtr)  LOC11431470 (mtr)  LOC100191137 (sly)  COL10 (gma)  LOC100794431 (gma)  LOC100802376 (gma)  LOC100804201 (gma)  COL8 (gma)  LOC101254368 (sly)  LOC101268413 (sly)  LOC103249145 (bra)  LOC103837073 (bra)  LOC103845200 (bra)  LOC103864587 (bra)  LOC103874359 (bra)  LOC123045911 (tae)  LOC123053778 (tae)  LOC123127672 (tae)  LOC123137439 (tae)  LOC123144785 (tae)  LOC123189661 (tae)  LOC123403770 (hvu)  LOC123427128 (hvu) 
Subcellular
localization
wolf
cyto 6,  mito 2,  chlo 1,  nucl 1  (predict for NP_197875.3)
Subcellular
localization
TargetP
scret 3  (predict for NP_197875.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00900 Terpenoid backbone biosynthesis 2
Genes directly connected with COL4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.4 AT2G35260 CAAX protease self-immunity protein [detail] 818093
5.6 HCF107 high chlorophyll fluorescent 107 [detail] 820961
5.5 AT5G14370 CCT motif family protein [detail] 831288
5.0 COL3 CONSTANS-like 3 [detail] 817016
Coexpressed
gene list		 [Coexpressed gene list for COL4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246977_at
246977_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246977_at
246977_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246977_at
246977_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832563      
Refseq ID (protein) NP_197875.3 


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