[←][→] ath   At5g41920 Gene
functional annotation
Function   GRAS family transcription factor    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0001714 [list] [network] endodermal cell fate specification  (1 genes)  IGI  
GO:0090610 [list] [network] bundle sheath cell fate specification  (2 genes)  IMP  
GO:0048366 [list] [network] leaf development  (465 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_199007.1 
BLAST NP_199007.1 
Orthologous [Ortholog page] LOC4343637 (osa)  LOC7453725 (ppo)  LOC7495639 (ppo)  LOC11442833 (mtr)  LOC100815217 (gma)  LOC100816249 (gma)  LOC101256307 (sly)  LOC103864129 (bra)  LOC123044515 (tae)  LOC123052377 (tae)  LOC123188217 (tae)  LOC123425660 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_199007.1)
Subcellular
localization
TargetP
other 9  (predict for NP_199007.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 2
Genes directly connected with AT5G41920 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.3 AT1G71180 6-phosphogluconate dehydrogenase family protein [detail] 843458
4.9 AT3G17950 uncharacterized protein [detail] 820807
4.9 BBX12 B-box type zinc finger protein with CCT domain-containing protein [detail] 817915
4.1 AT4G27240 zinc finger (C2H2 type) family protein [detail] 828832
Coexpressed
gene list		 [Coexpressed gene list for AT5G41920]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249279_at
249279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249279_at
249279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249279_at
249279_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834197      
Refseq ID (protein) NP_199007.1 


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