[←][→] ath   At5g42520 Gene
functional annotation
Function   basic pentacysteine 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009723 [list] [network] response to ethylene  (241 genes)  IGI  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IDA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001078690.1  NP_001078691.1  NP_568605.1 
BLAST NP_001078690.1  NP_001078691.1  NP_568605.1 
Orthologous [Ortholog page] BPC4 (ath)  BPC5 (ath)  LOC4340004 (osa)  LOC7453606 (ppo)  LOC7463987 (ppo)  LOC7477653 (ppo)  LOC7479698 (ppo)  LOC11428067 (mtr)  LOC11439421 (mtr)  LOC100783502 (gma)  LOC100785547 (gma)  LOC100809369 (gma)  LOC100813103 (gma)  BBR/BPC4 (sly)  LOC101259787 (sly)  LOC103828081 (bra)  LOC103830249 (bra)  LOC103835155 (bra)  LOC103841875 (bra)  LOC103861339 (bra)  LOC103862898 (bra)  LOC103864260 (bra)  LOC123088207 (tae)  LOC123150891 (tae)  LOC123168078 (tae)  LOC123410194 (hvu) 
Subcellular
localization
wolf
nucl 7,  mito 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_mito 1,  cyto_plas 1  (predict for NP_001078690.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001078691.1)
nucl 7,  mito 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_mito 1,  cyto_plas 1  (predict for NP_568605.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001078690.1)
other 5  (predict for NP_001078691.1)
other 8,  mito 3  (predict for NP_568605.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03015 mRNA surveillance pathway 3
ath04136 Autophagy - other 2
Genes directly connected with BPC6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.2 RS40 arginine/serine-rich splicing factor 35 [detail] 828654
7.1 PP2A-1 protein phosphatase 2A-2 [detail] 842276
7.0 AT3G47610 transcription regulator/ zinc ion binding protein [detail] 823915
6.7 VIP1 VIRE2-interacting protein 1 [detail] 840957
5.3 NINJA Putative interactor of JAZ [detail] 829012
Coexpressed
gene list		 [Coexpressed gene list for BPC6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249199_at
249199_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249199_at
249199_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249199_at
249199_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834259      
Refseq ID (protein) NP_001078690.1 
NP_001078691.1 
NP_568605.1 


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