[←][→] ath   At5g55970 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1901698 [list] [network] response to nitrogen compound  (723 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (108 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001332406.1  NP_568834.1  NP_851197.1 
BLAST NP_001332406.1  NP_568834.1  NP_851197.1 
Orthologous [Ortholog page] AT4G26580 (ath)  LOC4324244 (osa)  LOC7483653 (ppo)  LOC7485130 (ppo)  LOC100775217 (gma)  LOC100813670 (gma)  LOC100818715 (gma)  LOC101245380 (sly)  LOC101248749 (sly)  LOC103845037 (bra)  LOC103856955 (bra)  LOC103866333 (bra)  LOC120579317 (mtr)  LOC123058467 (tae)  LOC123065546 (tae)  LOC123074655 (tae)  LOC123440146 (hvu) 
Subcellular
localization
wolf
chlo 4,  vacu 3,  extr 1,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_001332406.1)
chlo 4,  vacu 3,  extr 1,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_568834.1)
chlo 4,  vacu 3,  extr 1,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_851197.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001332406.1)
chlo 9  (predict for NP_568834.1)
chlo 9  (predict for NP_851197.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G55970 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.0 AT3G49790 Carbohydrate-binding protein [detail] 824141
6.0 AT1G26800 RING/U-box superfamily protein [detail] 839223
5.7 RHA1B RING-H2 finger A1B [detail] 826738
4.8 HAT9 Homeobox-leucine zipper protein family [detail] 816811
4.0 CBSX5 Cystathionine beta-synthase (CBS) family protein [detail] 828855
Coexpressed
gene list		 [Coexpressed gene list for AT5G55970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248040_at
248040_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248040_at
248040_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248040_at
248040_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835695      
Refseq ID (protein) NP_001332406.1 
NP_568834.1 
NP_851197.1 


The preparation time of this page was 0.4 [sec].