[←][→] ath   AT5G55970 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_001332406.1  NP_568834.1  NP_851197.1 
BLAST NP_001332406.1  NP_568834.1  NP_851197.1 
Orthologous [Ortholog page] AT4G26580 (ath)  LOC4324244 (osa)  LOC100260079 (vvi)  LOC100775217 (gma)  LOC100813670 (gma)  LOC100818715 (gma)  LOC101245380 (sly)  LOC101248749 (sly)  LOC103651287 (zma)  LOC103845037 (bra)  LOC103856955 (bra)  LOC103866333 (bra) 
Subcellular
localization
wolf
chlo 4,  vacu 3,  extr 1,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_001332406.1)
chlo 4,  vacu 3,  extr 1,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_568834.1)
chlo 4,  vacu 3,  extr 1,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_851197.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001332406.1)
chlo 9  (predict for NP_568834.1)
chlo 9  (predict for NP_851197.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G55970 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT1G26800 RING/U-box superfamily protein [detail] 839223
6.0 AT3G49790 Carbohydrate-binding protein [detail] 824141
5.9 PP2-A13 phloem protein 2-A13 [detail] 825278
4.1 HAT9 Homeobox-leucine zipper protein family [detail] 816811
Coexpressed
gene list		 [Coexpressed gene list for AT5G55970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248040_at
248040_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248040_at
248040_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248040_at
248040_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835695      
Refseq ID (protein) NP_001332406.1 
NP_568834.1 
NP_851197.1 


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