[←][→] ath   AT5G60820 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
KEGG
Protein NP_200890.1 
BLAST NP_200890.1 
Orthologous [Ortholog page] AT3G02340 (ath)  AT5G08139 (ath)  AT5G15820 (ath)  LOC7453865 (ppo)  LOC7487122 (ppo)  LOC9268797 (osa)  LOC25493924 (mtr)  LOC25495490 (mtr)  LOC100217052 (zma)  LOC100268065 (vvi)  LOC100789524 (gma)  LOC100794303 (gma)  LOC100812037 (gma)  LOC100814798 (gma)  LOC101246882 (sly)  LOC101254448 (sly)  LOC101264712 (sly)  LOC103838502 (bra)  LOC103842992 (bra)  LOC103847578 (bra)  LOC103851005 (bra)  LOC103855760 (bra)  LOC103860540 (bra)  LOC104881617 (vvi) 
Subcellular
localization
wolf
cyto_nucl 4,  nucl 4,  cyto 4,  chlo 1,  vacu 1,  cysk 1  (predict for NP_200890.1)
Subcellular
localization
TargetP
other 7  (predict for NP_200890.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G60820 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 VFB2 VIER F-box protein 2 [detail] 824170
6.9 AT1G21200 sequence-specific DNA binding transcription factor [detail] 838715
6.9 AT2G17030 F-box SKIP23-like protein (DUF295) [detail] 816206
6.6 AT1G67190 F-box/RNI-like superfamily protein [detail] 843039
6.6 AT3G47940 DNAJ heat shock family protein [detail] 823949
5.5 AT1G11905 B-cell receptor-associated protein 31-like protein [detail] 837739
5.4 AT2G33390 hypothetical protein [detail] 817903
5.3 MEMB12 membrin 12 [detail] 835112
Coexpressed
gene list		 [Coexpressed gene list for AT5G60820]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247595_at
247595_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247595_at
247595_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247595_at
247595_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836203      
Refseq ID (protein) NP_200890.1 


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