Expression viewer
Gene annotation for LOC18108097
| Species | ppo |
|---|---|
| Symbol | LOC18108097 |
| Function* | RING-H2 finger protein ATL78 |
| Entrez Gene ID* | 18108097 |
| Other ID | POPTR_019G010600v3 |
Expression pattern of LOC18108097
| Normalized expression (Base-2 logarithm) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|
| 12.2 | SRP201788 | SRR9668917 | A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq] |
| 12.2 | SRP201788 | SRR9668918 | A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq] |
| 10.2 | SRP103219 | SRR5423590 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 9.4 | SRP103219 | SRR5423574 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 9.4 | SRP103219 | SRR5423598 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 9.3 | SRP103219 | SRR5423595 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 9.3 | SRP103219 | SRR5423597 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 9.2 | SRP103219 | SRR5423596 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 8.2 | SRP103219 | SRR5423572 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.7 | SRP103219 | SRR5423594 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.6 | SRP103219 | SRR5423592 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.5 | SRP071226 | SRR3207848 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 7.4 | SRP103219 | SRR5423593 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.4 | SRP103219 | SRR5423583 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.3 | SRP103219 | SRR5423555 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.2 | SRP103219 | SRR5423584 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.1 | SRP103219 | SRR5423588 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.0 | SRP103219 | SRR5423585 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.0 | SRP071226 | SRR3207847 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.9 | SRP103219 | SRR5423576 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.9 | SRP103219 | SRR5423586 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.9 | SRP103219 | SRR5423589 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.8 | SRP103219 | SRR5423591 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.8 | SRP103219 | SRR5423575 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.7 | SRP103219 | SRR5423573 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.6 | SRP071226 | SRR3207846 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.6 | SRP103219 | SRR5423579 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.6 | SRP103219 | SRR5423581 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.6 | SRP103219 | SRR5423582 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.5 | SRP103219 | SRR5423578 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.5 | SRP103219 | SRR5423587 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.4 | SRP103219 | SRR5423580 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.3 | SRP103219 | SRR5423577 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.1 | SRP103219 | SRR5423570 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.1 | SRP028843 | SRR952889 | SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa |
| 6.1 | SRP028843 | SRR952891 | SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa |
| 6.1 | SRP028843 | SRR952893 | SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa |
| 6.0 | SRP072680 | SRR3317206 | Populus trichocarpa Transcriptome or Gene expression |
| 6.0 | SRP072680 | SRR3317474 | Populus trichocarpa Transcriptome or Gene expression |
| 5.9 | SRP103219 | SRR5423566 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.8 | SRP103219 | SRR5423563 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.7 | SRP271234 | SRR12192591 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 5.7 | SRP271234 | SRR12192590 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 5.7 | SRP271234 | SRR12192592 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 5.7 | SRP271234 | SRR12192593 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 5.7 | SRP071226 | SRR3207918 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.6 | SRP103219 | SRR5423557 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423567 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.5 | SRP071226 | SRR3207879 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.4 | SRP103219 | SRR5423569 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.4 | SRP071226 | SRR3208043 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.3 | SRP071226 | SRR3207908 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.2 | SRP074300 | SRR3473014 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 5.1 | SRP103219 | SRR5423553 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.1 | SRP103219 | SRR5423556 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.1 | SRP103219 | SRR5423559 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.1 | SRP103219 | SRR5423565 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.1 | SRP071226 | SRR3207972 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.0 | SRP071226 | SRR3207857 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.0 | SRP071226 | SRR3207882 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.0 | SRP074300 | SRR3473013 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 4.9 | SRP071226 | SRR3207910 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.9 | SRP071226 | SRR3207877 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP071226 | SRR3207912 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP071226 | SRR3207914 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP103219 | SRR5423560 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 4.8 | SRP103219 | SRR5423562 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 4.8 | SRP071226 | SRR3208006 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP071226 | SRR3207844 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.7 | SRP071226 | SRR3207923 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.7 | SRP074300 | SRR3473002 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 4.7 | SRP071226 | SRR3207840 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3207891 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3208012 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3207815 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3207868 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3207887 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3207971 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3208011 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.6 | SRP071226 | SRR3207916 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.5 | SRP071226 | SRR3207835 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.5 | SRP071226 | SRR3207820 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.5 | SRP103219 | SRR5423545 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 4.4 | SRP071226 | SRR3207881 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.4 | SRP071226 | SRR3207885 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.3 | SRP071226 | SRR3207899 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.3 | SRP071226 | SRR3207864 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.3 | SRP074300 | SRR3473012 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 4.3 | SRP071226 | SRR3207884 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.3 | SRP071226 | SRR3208007 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.3 | SRP074300 | SRR3473001 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 4.3 | ERP021848 | ERR1864439 | High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 |
| 4.2 | SRP074300 | SRR3473000 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 4.2 | SRP071226 | SRR3207818 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.2 | SRP071226 | SRR3207917 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.2 | SRP071226 | SRR3208021 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.1 | SRP071226 | SRR3207855 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.1 | SRP071226 | SRR3207822 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.1 | SRP071226 | SRR3208019 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.1 | ERP021848 | ERR1864438 | High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 |
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