Expression viewer
Gene annotation for LOC18108098
| Species | ppo |
|---|---|
| Symbol | LOC18108098 |
| Function* | RING-H2 finger protein ATL78 |
| Entrez Gene ID* | 18108098 |
| Other ID | POPTR_019G010500v3 |
Expression pattern of LOC18108098
| Normalized expression (Base-2 logarithm) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|
| 9.6 | SRP103219 | SRR5423555 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 9.2 | SRP103219 | SRR5423590 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 8.7 | SRP071226 | SRR3207918 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 8.7 | SRP103219 | SRR5423572 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 8.6 | SRP103219 | SRR5423574 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 8.6 | SRP028843 | SRR952889 | SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa |
| 7.9 | SRP071226 | SRR3207889 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 7.8 | SRP103219 | SRR5423557 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.8 | SRP103219 | SRR5423596 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.8 | SRP103219 | SRR5423597 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.6 | SRP103219 | SRR5423591 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.4 | SRP103219 | SRR5423553 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.4 | SRP103219 | SRR5423592 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.4 | SRP103219 | SRR5423593 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.4 | SRP103219 | SRR5423598 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.2 | SRP103219 | SRR5423582 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 7.0 | SRP071226 | SRR3207912 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.9 | SRP103219 | SRR5423556 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.9 | SRP103219 | SRR5423569 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.9 | SRP103219 | SRR5423588 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.9 | SRP103219 | SRR5423595 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.8 | SRP035471 | SRR1121302 | Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa |
| 6.8 | SRP271234 | SRR12192588 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 6.8 | SRP271234 | SRR12192589 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 6.6 | SRP071226 | SRR3207855 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.6 | SRP071226 | SRR3207914 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.6 | SRP071226 | SRR3207857 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.6 | SRP103219 | SRR5423558 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.6 | SRP103219 | SRR5423562 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.6 | SRP103219 | SRR5423563 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.6 | SRP103219 | SRR5423576 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.6 | SRP071226 | SRR3207847 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.5 | SRP071226 | SRR3207885 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.5 | SRP071226 | SRR3207836 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.4 | SRP071226 | SRR3207890 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.2 | SRP071226 | SRR3207913 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.2 | SRP103219 | SRR5423568 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.2 | SRP103219 | SRR5423577 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.2 | SRP103219 | SRR5423584 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.2 | SRP103219 | SRR5423585 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.2 | SRP103219 | SRR5423586 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 6.1 | SRP071226 | SRR3207694 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 6.0 | SRP071226 | SRR3207886 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.9 | SRP071226 | SRR3207908 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.9 | SRP071226 | SRR3208011 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.9 | SRP071226 | SRR3207910 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.8 | SRP071226 | SRR3207823 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.8 | SRP071226 | SRR3207837 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.8 | SRP071226 | SRR3207832 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.7 | SRP071226 | SRR3207846 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.7 | SRP071226 | SRR3207848 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.6 | SRP071226 | SRR3207881 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.6 | SRP071226 | SRR3207833 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.6 | SRP071226 | SRR3207772 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.6 | SRP103219 | SRR5423560 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423573 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423578 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423580 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423589 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423559 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423564 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423566 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423570 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423575 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423579 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423581 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423587 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.6 | SRP103219 | SRR5423594 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus |
| 5.5 | SRP271234 | SRR12192582 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 5.5 | SRP271234 | SRR12192583 | RNAseq of transfected protoplasts of Populus trichocarpa |
| 5.5 | SRP071226 | SRR3207818 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.4 | SRP071226 | SRR3207839 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.2 | SRP072680 | SRR3317181 | Populus trichocarpa Transcriptome or Gene expression |
| 5.2 | SRP071226 | SRR3207894 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.2 | SRP201788 | SRR9321774 | A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq] |
| 5.2 | SRP201788 | SRR9321775 | A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq] |
| 5.2 | SRP201788 | SRR9321778 | A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq] |
| 5.1 | SRP074300 | SRR3473014 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 5.1 | SRP071226 | SRR3207838 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.1 | SRP071226 | SRR3207854 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.1 | SRP071226 | SRR3207966 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.1 | SRP072040 | SRR3241538 | RNAseq of drought treated Populus trichocarpa |
| 5.1 | SRP071226 | SRR3207898 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.1 | SRP071226 | SRR3207877 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.0 | SRP071226 | SRR3207796 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.0 | SRP071226 | SRR3207895 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 5.0 | SRP071226 | SRR3207827 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.9 | ERP021848 | ERR1864476 | High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 |
| 4.9 | ERP021848 | ERR1864474 | High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 |
| 4.9 | ERP021848 | ERR1864475 | High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 |
| 4.9 | SRP072040 | SRR3241529 | RNAseq of drought treated Populus trichocarpa |
| 4.8 | SRP071226 | SRR3207762 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP071226 | SRR3207815 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP071226 | SRR3207856 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP071226 | SRR3207882 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.8 | SRP071226 | SRR3208001 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.7 | SRP074300 | SRR3473012 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa |
| 4.7 | SRP071226 | SRR3208043 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.7 | SRP071226 | SRR3207916 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) |
| 4.7 | ERP021848 | ERR1864456 | High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 |
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