Expression viewer

Gene annotation for LOC4325142

Platform:
Species osa
Symbol LOC4325142
Function* uncharacterized LOC4325142
Entrez Gene ID* 4325142
Other ID Os01g0756600




Expression pattern of LOC4325142



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
13.4 SRP331960 SRR18358777 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
13.3 SRP331960 SRR18358778 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.7 SRP331960 SRR18358776 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.3 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
11.6 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 DRP000716 DRR002707 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.1 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.0 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.0 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.0 DRP001141 DRR013388 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
10.9 DRP001141 DRR013389 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
10.9 SRP327364 SRR15060358 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.9 SRP041468 SRR1264024 Oryza sativa Japonica Group Transcriptome or Gene expression
10.9 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.8 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.8 SRP357677 SRR17843175 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.8 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.8 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.8 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.7 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.7 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 DRP000716 DRR002708 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.7 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.7 SRP151597 SRR7450902 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.6 SRP041468 SRR1264034 Oryza sativa Japonica Group Transcriptome or Gene expression
10.6 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 SRP327364 SRR15060374 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.6 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 ERP024350 ERR2061600 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
10.6 SRP309118 SRR13847350 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.5 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.5 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.5 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.5 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.5 SRP327364 SRR15060436 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.5 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.5 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
10.5 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.4 SRP229366 SRR10423439 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
10.4 SRP362107 SRR18189501 Oryza sativa Transcriptome or Gene expression
10.4 DRP000716 DRR002695 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.4 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.4 SRP181124 SRR8469601 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.4 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.4 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP181124 SRR8469599 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.4 SRP327364 SRR15060438 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.4 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.4 SRP041468 SRR1985011 Oryza sativa Japonica Group Transcriptome or Gene expression
10.3 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.3 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.3 SRP115210 SRR5925510 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.3 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.3 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
10.3 SRP181124 SRR8469617 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.3 SRP327364 SRR15060369 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.2 SRP357677 SRR17843174 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.2 SRP106796 SRR5526307 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
10.2 SRP115210 SRR5925509 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP115210 SRR5925512 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP170932 SRR8247778 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
10.2 SRP170932 SRR8247777 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
10.2 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP092175 SRR4457258 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
10.2 SRP151597 SRR7450901 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.2 SRP309118 SRR13847351 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.2 SRP181124 SRR8469593 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.2 SRP327364 SRR15060452 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.1 SRP181124 SRR8469600 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.1 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
10.1 SRP115210 SRR5925511 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP083700 SRR4098198 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.1 SRP357677 SRR17843171 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.1 SRP167327 SRR8140270 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
10.1 SRP167327 SRR8140269 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
10.1 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.1 SRP115030 SRR5909345 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.1 SRP356482 SRR17720814 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
10.1 SRP131107 SRR6502107 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
10.1 ERP013234 ERR1142050 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.0 SRP309118 SRR13847354 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.0 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.0 SRP327364 SRR15060455 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.0 SRP181124 SRR8469615 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.0 DRP000716 DRR002693 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.0 SRP220388 SRR10058417 Oryza sativa Transcriptome or Gene expression
10.0 SRP151597 SRR7450898 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.0 SRP181124 SRR8469602 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.0 SRP181124 SRR8469618 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.0 SRP170932 SRR8247776 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
10.0 SRP093884 SRR5052724 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
10.0 SRP115210 SRR5925526 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.0 SRP115210 SRR5925576 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.0 SRP309118 SRR13847387 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.0 ERP024350 ERR2061601 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
10.0 SRP181124 SRR8469616 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
The output is the 100 samples with the largest contribution to the coexpression.



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