Expression viewer

Gene annotation for LOC4325586

Platform:
Species osa
Symbol LOC4325586
Function* probable choline kinase 2
Entrez Gene ID* 4325586
Other ID Os01g0717000




Expression pattern of LOC4325586



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.6 SRP041468 SRR1987329 Oryza sativa Japonica Group Transcriptome or Gene expression
12.6 SRP254459 SRR11444588 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
12.4 SRP331960 SRR15411217 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.4 DRP000716 DRR002691 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
12.4 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
12.3 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
12.3 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.3 SRP115210 SRR5925502 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.3 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.2 SRP115030 SRR5909337 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
12.2 SRP181124 SRR8469580 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
12.2 SRP115210 SRR5925556 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.2 SRP181124 SRR8469581 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
12.2 SRP331960 SRR15411216 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.1 SRP181124 SRR8469579 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
12.1 SRP041468 SRR1987331 Oryza sativa Japonica Group Transcriptome or Gene expression
12.1 SRP115210 SRR5925520 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.1 DRP000716 DRR002704 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
12.1 SRP115030 SRR5909336 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
12.0 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
12.0 SRP115210 SRR5925559 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.0 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
12.0 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 SRP115210 SRR5925557 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.0 DRP000716 DRR002690 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
12.0 DRP000716 DRR002718 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
12.0 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
12.0 ERP024350 ERR2061602 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
12.0 SRP115210 SRR5925560 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.9 SRP181124 SRR8469582 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.9 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.9 SRP167327 SRR8140289 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
11.9 SRP115210 SRR5925558 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.9 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.9 SRP167327 SRR8140290 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
11.9 SRP258176 SRR11601216 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.9 ERP024350 ERR2061603 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
11.9 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.9 SRP356482 SRR17720818 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.9 SRP309118 SRR13847371 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.8 SRP115210 SRR5925503 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.8 DRP000716 DRR002705 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.8 SRP115210 SRR5925506 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP331960 SRR15411165 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.8 SRP115210 SRR5925504 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.8 SRP115210 SRR5925505 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.7 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.7 SRP331960 SRR15411214 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.7 DRP000315 DRR000760 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.7 SRP327364 SRR15060369 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.7 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.7 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.7 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.7 SRP093884 SRR5052708 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
11.7 SRP220388 SRR10058421 Oryza sativa Transcriptome or Gene expression
11.6 SRP115030 SRR5909340 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.6 DRP000716 DRR002719 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.6 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.6 SRP127575 SRR6420527 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
11.6 SRP254459 SRR11444591 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
11.6 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.6 SRP041468 SRR1985033 Oryza sativa Japonica Group Transcriptome or Gene expression
11.6 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.5 SRP041468 SRR1264034 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP041468 SRR1987327 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP331960 SRR15411213 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.5 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.5 SRP229366 SRR10423432 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
11.5 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.5 SRP092175 SRR4457245 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.5 SRP093884 SRR5052710 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
11.5 SRP041468 SRR1985034 Oryza sativa Japonica Group Transcriptome or Gene expression
11.4 SRP356482 SRR17720810 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.4 SRP127575 SRR6420524 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
11.4 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP229366 SRR10423431 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
11.4 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
11.4 SRP115210 SRR5925524 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP270778 SRR12165249 RNA-seq analysis of different sub-regions of developing grains in rice
11.4 SRP115210 SRR5925521 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP115210 SRR5925523 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP327364 SRR15060358 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.4 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP327364 SRR15060374 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.4 SRP362107 SRR18189500 Oryza sativa Transcriptome or Gene expression
11.4 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP309118 SRR13847352 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.4 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP131107 SRR6502106 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
11.3 SRP181124 SRR8469609 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.3 SRP356482 SRR17720817 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.3 SRP270778 SRR12165254 RNA-seq analysis of different sub-regions of developing grains in rice
11.3 SRP020657 SRR823543 Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
The output is the 100 samples with the largest contribution to the coexpression.



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