Expression viewer

Gene annotation for LOC4325816

Platform:
Species osa
Symbol LOC4325816
Function* CASP-like protein 1E1
Entrez Gene ID* 4325816
Other ID OSNPB_010363300




Expression pattern of LOC4325816



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
10.9 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.3 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.1 SRP357677 SRR17843174 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.1 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.0 SRP092175 SRR4457258 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
10.0 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.9 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
9.8 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
9.8 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.8 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.8 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.8 SRP327364 SRR15060358 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.8 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
9.7 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.7 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP041468 SRR1985011 Oryza sativa Japonica Group Transcriptome or Gene expression
9.7 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.6 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.6 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
9.6 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.6 SRP181124 SRR8469601 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.6 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.6 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.6 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.6 SRP093884 SRR5052713 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
9.6 SRP092175 SRR4457260 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.6 SRP327364 SRR15060438 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.5 SRP041468 SRR1985033 Oryza sativa Japonica Group Transcriptome or Gene expression
9.5 SRP327364 SRR15060369 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.5 SRP258176 SRR11601215 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
9.5 DRP000315 DRR000760 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
9.5 SRP115030 SRR5909338 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
9.5 SRP181124 SRR8469599 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.5 SRP181124 SRR8469600 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.5 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.4 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.4 SRP115210 SRR5925568 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.4 SRP362107 SRR18189506 Oryza sativa Transcriptome or Gene expression
9.4 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
9.4 ERP024350 ERR2061603 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
9.4 SRP106796 SRR5526311 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
9.3 SRP309118 SRR13847363 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
9.3 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
9.3 SRP041468 SRR1985034 Oryza sativa Japonica Group Transcriptome or Gene expression
9.3 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
9.3 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.3 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
9.3 SRP327364 SRR15060436 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.3 SRP270778 SRR12165275 RNA-seq analysis of different sub-regions of developing grains in rice
9.3 DRP000716 DRR002694 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.3 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.3 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.2 SRP254459 SRR11444599 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
9.2 SRP254459 SRR11444598 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
9.2 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
9.2 SRP041468 SRR1985027 Oryza sativa Japonica Group Transcriptome or Gene expression
9.2 SRP181124 SRR8469594 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.2 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.2 SRP362107 SRR18189505 Oryza sativa Transcriptome or Gene expression
9.2 SRP220388 SRR10058414 Oryza sativa Transcriptome or Gene expression
9.2 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.2 SRP093884 SRR5052708 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
9.2 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.2 SRP331960 SRR15411234 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.2 SRP254459 SRR11444600 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
9.2 SRP331960 SRR15411204 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.2 SRP115030 SRR5909344 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
9.1 SRP041468 SRR1564285 Oryza sativa Japonica Group Transcriptome or Gene expression
9.1 SRP357677 SRR17843175 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
9.1 SRP356482 SRR17720820 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
9.1 DRP000716 DRR002693 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.1 SRP327364 SRR15060439 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.1 DRP000315 DRR000768 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
9.1 SRP020657 SRR823547 Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
9.1 DRP000315 DRR000759 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
9.1 SRP041468 SRR1564286 Oryza sativa Japonica Group Transcriptome or Gene expression
9.1 SRP093884 SRR5052731 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
9.1 DRP000716 DRR002695 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.0 SRP092175 SRR4457251 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.0 SRP309118 SRR13847383 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
9.0 SRP115210 SRR5925571 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.0 SRP270778 SRR12165280 RNA-seq analysis of different sub-regions of developing grains in rice
9.0 SRP041468 SRR1985047 Oryza sativa Japonica Group Transcriptome or Gene expression
9.0 SRP020657 SRR823549 Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
9.0 SRP309118 SRR13847377 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
9.0 SRP041468 SRR1985017 Oryza sativa Japonica Group Transcriptome or Gene expression
9.0 SRP170932 SRR8247768 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
9.0 SRP093884 SRR5052724 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
9.0 SRP127575 SRR6420538 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
9.0 SRP331960 SRR15411233 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
8.9 SRP220388 SRR10058420 Oryza sativa Transcriptome or Gene expression
8.9 SRP056884 SRR1952793 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
8.9 SRP270778 SRR12165278 RNA-seq analysis of different sub-regions of developing grains in rice
The output is the 100 samples with the largest contribution to the coexpression.



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