Expression viewer

Gene annotation for LOC4330642

Platform:
Species osa
Symbol LOC4330642
Function* nudix hydrolase 21, chloroplastic
Entrez Gene ID* 4330642
Other ID Os02g0734300




Expression pattern of LOC4330642



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.6 SRP309118 SRR13847363 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
12.2 SRP093884 SRR5052713 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
11.9 SRP258176 SRR11601222 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.9 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.7 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.7 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.6 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
11.6 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
11.6 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.5 SRP041468 SRR1264024 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP041468 SRR1264028 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP115030 SRR5909340 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.4 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP181124 SRR8469587 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.4 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP115030 SRR5909339 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.3 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.3 SRP357677 SRR17843162 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
11.3 DRP000716 DRR002694 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.3 SRP181124 SRR8469588 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.3 SRP270778 SRR12165255 RNA-seq analysis of different sub-regions of developing grains in rice
11.3 SRP041468 SRR1987330 Oryza sativa Japonica Group Transcriptome or Gene expression
11.3 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.2 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP331960 SRR15411217 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.2 DRP000315 DRR000763 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.2 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.2 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.2 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.2 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.2 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.2 SRP181124 SRR8469590 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.2 SRP254459 SRR11444588 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
11.2 SRP181124 SRR8469589 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.2 SRP092175 SRR4457232 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.2 SRP041468 SRR1264034 Oryza sativa Japonica Group Transcriptome or Gene expression
11.1 SRP092175 SRR4457233 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.1 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.1 SRP258176 SRR11601203 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.1 SRP327364 SRR15060369 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.0 SRP092175 SRR4457251 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.0 SRP258176 SRR11601216 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.0 SRP041468 SRR1987328 Oryza sativa Japonica Group Transcriptome or Gene expression
11.0 SRP041468 SRR1563144 Oryza sativa Japonica Group Transcriptome or Gene expression
11.0 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
11.0 SRP151597 SRR7450908 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.9 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.9 DRP000315 DRR000753 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
10.9 SRP356482 SRR17720823 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
10.9 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.9 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.9 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.9 SRP151597 SRR7450904 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.9 DRP000716 DRR002691 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.9 SRP131107 SRR6502107 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
10.9 SRP115210 SRR5925568 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.9 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.9 SRP270778 SRR12165252 RNA-seq analysis of different sub-regions of developing grains in rice
10.9 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.8 SRP356482 SRR17720811 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
10.8 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 SRP010960 SRR408738 Oryza sativa Japonica Group Transcriptome or Gene expression
10.8 SRP049054 SRR1616169 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
10.8 SRP331960 SRR15411178 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.8 DRP000716 DRR002719 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.8 SRP020657 SRR823547 Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
10.8 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 SRP010960 SRR408746 Oryza sativa Japonica Group Transcriptome or Gene expression
10.8 SRP127575 SRR6420540 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
10.8 SRP254459 SRR11444586 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.7 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.7 SRP331960 SRR15411201 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.7 SRP356482 SRR17720822 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
10.7 SRP115210 SRR5925500 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP357677 SRR17843167 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.7 SRP115030 SRR5909338 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.7 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP049054 SRR1616570 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
10.7 SRP254459 SRR11444591 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.7 SRP115210 SRR5925569 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP115210 SRR5925571 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP127575 SRR6420537 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
10.7 SRP151597 SRR7450909 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.7 SRP309118 SRR13847352 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.7 SRP327364 SRR15060354 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.7 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP362107 SRR18189506 Oryza sativa Transcriptome or Gene expression
10.7 SRP357677 SRR17843165 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
The output is the 100 samples with the largest contribution to the coexpression.



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