Expression viewer

Gene annotation for LOC4340153

Platform:
Species osa
Symbol LOC4340153
Function* ATP-dependent 6-phosphofructokinase 3
Entrez Gene ID* 4340153
Other ID Os06g0151900




Expression pattern of LOC4340153



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
13.4 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
12.2 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
12.2 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.1 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
12.1 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 SRP151597 SRR7450916 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
12.0 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 DRP000716 DRR002720 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
12.0 SRP041468 SRR1985035 Oryza sativa Japonica Group Transcriptome or Gene expression
11.9 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.9 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.9 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.9 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.9 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.7 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.7 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.7 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.7 SRP041468 SRR1985041 Oryza sativa Japonica Group Transcriptome or Gene expression
11.7 SRP331960 SRR15411235 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.7 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.7 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.6 SRP115210 SRR5925502 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.6 SRP092175 SRR4457233 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.6 SRP181124 SRR8469601 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.6 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.6 SRP331960 SRR15411231 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.6 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP083700 SRR4098198 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.5 SRP357677 SRR17843169 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
11.5 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.5 SRP331960 SRR15411200 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.5 SRP092175 SRR4457232 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.5 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP331960 SRR15411234 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.5 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.5 ERP024350 ERR2061600 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
11.5 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP115210 SRR5925520 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP181124 SRR8469602 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.4 SRP010960 SRR408745 Oryza sativa Japonica Group Transcriptome or Gene expression
11.4 DRP000716 DRR002694 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.4 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.4 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
11.4 SRP041468 SRR1985046 Oryza sativa Japonica Group Transcriptome or Gene expression
11.4 SRP331960 SRR15411204 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.3 DRP000716 DRR002691 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.3 SRP331960 SRR15411201 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.3 SRP167327 SRR8140270 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
11.3 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.3 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.3 SRP331960 SRR15411230 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.2 SRP041468 SRR1985036 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP167327 SRR8140269 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
11.2 SRP327364 SRR15060409 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.2 SRP041468 SRR1985017 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP115210 SRR5925556 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP309118 SRR13847347 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.2 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.2 SRP115210 SRR5925568 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP327364 SRR15060358 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.2 ERP024350 ERR2061603 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
11.1 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.1 SRP331960 SRR15411202 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.1 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP115030 SRR5909331 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.1 SRP331960 SRR15411233 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.1 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.1 SRP356482 SRR17720818 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.1 SRP258176 SRR11601222 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.1 SRP254459 SRR11444595 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
11.1 SRP331960 SRR15411205 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.1 SRP115210 SRR5925526 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP083700 SRR4098178 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.1 SRP092175 SRR4457235 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.1 DRP001141 DRR013398 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
11.1 SRP151597 SRR7450914 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
11.0 SRP170932 SRR8247777 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
11.0 SRP356482 SRR17720816 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.0 SRP083700 SRR4098186 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.0 DRP000716 DRR002704 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.0 SRP093884 SRR5052713 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
11.0 DRP001141 DRR013396 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
11.0 SRP056884 SRR1952802 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.0 SRP309118 SRR13847363 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.0 SRP106796 SRR5526309 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
11.0 SRP181124 SRR8469600 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.0 SRP093884 SRR5052724 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
11.0 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.0 SRP041468 SRR1985019 Oryza sativa Japonica Group Transcriptome or Gene expression
11.0 SRP092175 SRR4457251 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.0 SRP020657 SRR823549 Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
10.9 SRP362107 SRR18189506 Oryza sativa Transcriptome or Gene expression
10.9 SRP254459 SRR11444597 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
The output is the 100 samples with the largest contribution to the coexpression.



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