Expression viewer

Gene annotation for LOC4340670

Platform:
Species osa
Symbol LOC4340670
Function* nudix hydrolase 21, chloroplastic
Entrez Gene ID* 4340670
Other ID Os06g0255400




Expression pattern of LOC4340670



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.5 SRP331960 SRR15411217 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.1 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.8 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.8 SRP092175 SRR4457251 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
10.8 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
10.7 SRP331960 SRR15411216 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.7 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP309118 SRR13847359 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.7 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 SRP331960 SRR15411165 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.6 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.5 SRP258176 SRR11601203 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.5 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.4 SRP010960 SRR408738 Oryza sativa Japonica Group Transcriptome or Gene expression
10.4 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.3 SRP258176 SRR11601222 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.3 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
10.3 SRP327364 SRR15060353 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.3 SRP181124 SRR8469582 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.3 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.2 SRP093884 SRR5052713 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
10.2 DRP000716 DRR002694 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.2 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP115030 SRR5909338 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.2 SRP181124 SRR8469579 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.2 SRP181124 SRR8469581 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.2 SRP327364 SRR15060354 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.2 SRP151597 SRR7450914 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.2 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP357677 SRR17843162 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.1 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP181124 SRR8469580 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.1 SRP127575 SRR6420524 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
10.1 SRP127575 SRR6420526 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
10.1 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.0 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.0 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.0 DRP000716 DRR002707 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.0 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.0 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.0 SRP327364 SRR15060369 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.0 SRP151597 SRR7450916 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
9.9 SRP092175 SRR4457232 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.9 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
9.9 SRP151597 SRR7450913 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
9.9 SRP115030 SRR5909339 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
9.9 SRP093884 SRR5052719 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
9.9 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
9.9 SRP115210 SRR5925520 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP331960 SRR15411202 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.9 SRP331960 SRR15411205 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.9 DRP000716 DRR002695 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.8 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.8 SRP151597 SRR7450915 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
9.8 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.8 DRP000315 DRR000760 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
9.8 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.8 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
9.8 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
9.8 SRP041468 SRR1985011 Oryza sativa Japonica Group Transcriptome or Gene expression
9.8 DRP000315 DRR000767 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
9.8 SRP041468 SRR1563144 Oryza sativa Japonica Group Transcriptome or Gene expression
9.8 SRP331960 SRR15411214 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.7 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP331960 SRR15411172 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.7 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP092175 SRR4457233 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.7 SRP357677 SRR17843165 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
9.7 SRP041468 SRR1564280 Oryza sativa Japonica Group Transcriptome or Gene expression
9.7 SRP115030 SRR5909340 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
9.7 SRP254459 SRR11444606 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
9.7 SRP362107 SRR18189506 Oryza sativa Transcriptome or Gene expression
9.7 ERP024350 ERR2061594 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
9.7 SRP356482 SRR17720816 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
9.7 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.6 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.6 SRP127575 SRR6420525 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
9.6 SRP356482 SRR17720827 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
9.6 SRP254459 SRR11444595 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
9.6 DRP000716 DRR002709 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.6 SRP220388 SRR10058414 Oryza sativa Transcriptome or Gene expression
9.6 SRP229366 SRR10423433 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
9.6 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.6 SRP083700 SRR4098189 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
9.6 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.6 SRP131107 SRR6502106 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
9.6 DRP000716 DRR002693 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.6 SRP131107 SRR6502091 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
9.6 DRP000716 DRR002687 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.6 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.6 DRP000315 DRR000750 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
9.5 SRP131107 SRR6502107 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
9.5 SRP041468 SRR1985033 Oryza sativa Japonica Group Transcriptome or Gene expression
9.5 DRP000716 DRR002708 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.5 SRP356482 SRR17720828 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
9.5 SRP331960 SRR15411201 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.5 SRP083700 SRR4098183 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
9.5 SRP010960 SRR408735 Oryza sativa Japonica Group Transcriptome or Gene expression
The output is the 100 samples with the largest contribution to the coexpression.



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