Expression viewer

Gene annotation for LOC4341465

Platform:
Species osa
Symbol LOC4341465
Function* SPX domain-containing protein 1-like
Entrez Gene ID* 4341465
Other ID OSNPB_060603600




Expression pattern of LOC4341465



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.1 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.9 SRP092175 SRR4457246 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.7 SRP181124 SRR8469600 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.7 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP092175 SRR4457265 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.5 SRP041468 SRR1987333 Oryza sativa Japonica Group Transcriptome or Gene expression
11.3 SRP331960 SRR15411219 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.3 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.3 SRP356482 SRR17720813 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.3 SRP357677 SRR17843162 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
11.3 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.3 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 DRP000315 DRR000747 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.2 SRP115030 SRR5909342 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.2 DRP000315 DRR000763 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.1 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.1 SRP356482 SRR17720811 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.1 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.1 DRP000315 DRR000753 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.1 SRP041468 SRR1987327 Oryza sativa Japonica Group Transcriptome or Gene expression
11.1 SRP115030 SRR5909343 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.1 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.1 SRP331960 SRR15411220 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.1 SRP041468 SRR1987329 Oryza sativa Japonica Group Transcriptome or Gene expression
11.0 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP115210 SRR5925526 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 DRP000315 DRR000749 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.0 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.0 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.0 SRP254459 SRR11444593 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
11.0 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.0 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.9 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.9 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.9 SRP083700 SRR4098198 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.9 SRP309118 SRR13847371 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.9 SRP254459 SRR11444594 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.9 SRP056884 SRR1952792 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.9 SRP254459 SRR11444604 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.9 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.8 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 SRP309118 SRR13847347 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.8 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.8 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.8 SRP010960 SRR408739 Oryza sativa Japonica Group Transcriptome or Gene expression
10.8 SRP115030 SRR5909346 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.8 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 SRP151597 SRR7450910 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.8 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP115030 SRR5909341 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.7 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.7 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 ERP024350 ERR2061606 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
10.7 SRP331960 SRR15411173 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.7 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP327364 SRR15060358 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.7 SRP254459 SRR11444592 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.7 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.6 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.6 SRP115210 SRR5925530 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.6 SRP115210 SRR5925511 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 SRP115210 SRR5925512 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 SRP254459 SRR11444606 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.6 SRP258176 SRR11601216 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.6 SRP181124 SRR8469610 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.6 SRP331960 SRR15411172 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.6 DRP001141 DRR013390 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
10.6 SRP254459 SRR11444605 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.6 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.6 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.6 ERP024350 ERR2061605 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
10.6 SRP331960 SRR15411190 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.6 SRP115210 SRR5925509 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.5 ERP024350 ERR2061607 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
10.5 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.5 SRP258176 SRR11601218 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.5 SRP115210 SRR5925529 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.5 SRP151597 SRR7450911 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.5 SRP331960 SRR15411171 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.5 SRP115210 SRR5925510 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.5 SRP115210 SRR5925527 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.5 SRP151597 SRR7450912 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.5 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP115210 SRR5925528 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP131107 SRR6502107 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
10.4 SRP041468 SRR1987331 Oryza sativa Japonica Group Transcriptome or Gene expression
10.4 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP115210 SRR5925616 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP049054 SRR1616169 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
10.4 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP327364 SRR15060354 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.4 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.4 SRP170932 SRR8247783 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
10.4 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
The output is the 100 samples with the largest contribution to the coexpression.



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