Expression viewer

Gene annotation for LOC4343899

Platform:
Species osa
Symbol LOC4343899
Function* protein TIFY 10b-like
Entrez Gene ID* 4343899
Other ID OSNPB_070615200




Expression pattern of LOC4343899



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
15.1 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
13.8 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
13.5 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
13.4 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
13.4 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
13.3 SRP181124 SRR8469599 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
13.3 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
13.3 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
13.3 SRP181124 SRR8469602 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
13.3 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
13.2 SRP181124 SRR8469601 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
13.2 SRP115030 SRR5909337 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
13.2 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
13.1 DRP000716 DRR002691 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
13.1 SRP331960 SRR15411171 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
13.1 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
13.1 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
13.1 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
13.1 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
13.1 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
13.1 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
13.1 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
13.0 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
13.0 SRP049054 SRR1616148 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
13.0 DRP000716 DRR002704 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
13.0 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
13.0 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
13.0 DRP000716 DRR002705 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
13.0 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
13.0 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
13.0 SRP041468 SRR1985011 Oryza sativa Japonica Group Transcriptome or Gene expression
12.9 SRP254459 SRR11444588 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
12.9 SRP258176 SRR11601223 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
12.9 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.9 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
12.9 SRP331960 SRR15411220 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.9 SRP041468 SRR1985033 Oryza sativa Japonica Group Transcriptome or Gene expression
12.9 SRP115210 SRR5925526 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.9 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.9 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.9 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.9 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
12.8 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.8 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.8 SRP356482 SRR17720822 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
12.8 SRP093884 SRR5052708 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
12.8 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.8 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.8 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.8 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.8 SRP181124 SRR8469600 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
12.8 SRP327364 SRR15060452 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.7 SRP170932 SRR8247777 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
12.7 ERP024350 ERR2061602 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
12.7 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.7 SRP270778 SRR12165258 RNA-seq analysis of different sub-regions of developing grains in rice
12.7 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
12.7 SRP309118 SRR13847371 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
12.7 SRP092175 SRR4457233 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
12.7 SRP229366 SRR10423433 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
12.7 SRP115030 SRR5909336 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
12.7 SRP309118 SRR13847350 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
12.7 SRP327364 SRR15060453 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.7 SRP362107 SRR18189500 Oryza sativa Transcriptome or Gene expression
12.7 SRP331960 SRR15411172 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.6 SRP093884 SRR5052710 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
12.6 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.6 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.6 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.6 DRP000716 DRR002718 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
12.6 SRP092175 SRR4457235 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
12.6 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
12.6 SRP327364 SRR15060432 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.6 SRP131107 SRR6502085 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
12.6 SRP229366 SRR10423434 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
12.6 SRP357677 SRR17843162 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
12.6 SRP127575 SRR6420527 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
12.6 DRP000716 DRR002719 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
12.6 SRP327364 SRR15060436 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.6 SRP115210 SRR5925529 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.6 SRP049054 SRR1616149 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
12.6 SRP167327 SRR8140279 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
12.6 SRP041468 SRR1985034 Oryza sativa Japonica Group Transcriptome or Gene expression
12.5 SRP327364 SRR15060434 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.5 SRP115210 SRR5925530 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.5 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
12.5 SRP115210 SRR5925527 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.5 ERP024350 ERR2061603 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
12.5 SRP049054 SRR1616150 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
12.5 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
12.5 SRP092175 SRR4457232 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
12.5 SRP167327 SRR8140280 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
12.5 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.5 SRP115210 SRR5925528 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.5 SRP327364 SRR15060438 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.5 SRP181124 SRR8469598 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
12.5 SRP127575 SRR6420526 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
12.5 SRP362107 SRR18189496 Oryza sativa Transcriptome or Gene expression
12.5 SRP092175 SRR4457251 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
12.5 SRP309118 SRR13847363 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
The output is the 100 samples with the largest contribution to the coexpression.



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