Expression viewer

Gene annotation for LOC4346129

Platform:
Species osa
Symbol LOC4346129
Function* nucleotide pyrophosphatase/phosphodiesterase
Entrez Gene ID* 4346129
Other ID Os08g0531000




Expression pattern of LOC4346129



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
13.6 SRP309118 SRR13847361 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
12.9 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
12.5 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
12.4 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.3 SRP115030 SRR5909337 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
12.3 SRP041468 SRR1264034 Oryza sativa Japonica Group Transcriptome or Gene expression
12.3 SRP331960 SRR15411175 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.2 SRP357677 SRR17843174 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
12.1 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 ERP024350 ERR2061600 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
12.0 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 SRP254459 SRR11444588 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
12.0 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
12.0 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
12.0 SRP331960 SRR15411170 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.0 SRP362107 SRR18189505 Oryza sativa Transcriptome or Gene expression
11.9 SRP356482 SRR17720827 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.8 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
11.8 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.8 SRP327364 SRR15060432 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.8 SRP115210 SRR5925502 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.8 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.8 DRP000315 DRR000763 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.7 SRP327364 SRR15060434 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.7 SRP327364 SRR15060374 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.7 SRP092175 SRR4457234 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.7 SRP151597 SRR7450898 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
11.7 DRP001141 DRR013388 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
11.7 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.7 SRP327364 SRR15060357 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.7 SRP327364 SRR15060356 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.7 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.7 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.6 SRP056884 SRR1952793 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.6 SRP258176 SRR11601216 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.6 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP151597 SRR7450902 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
11.6 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.6 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP010960 SRR408749 Oryza sativa Japonica Group Transcriptome or Gene expression
11.6 SRP309118 SRR13847363 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.6 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.6 SRP020657 SRR823543 Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
11.6 SRP092175 SRR4457236 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.6 SRP331960 SRR15411203 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.5 SRP010960 SRR408738 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP115210 SRR5925520 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP327364 SRR15060405 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.5 SRP041468 SRR1985036 Oryza sativa Japonica Group Transcriptome or Gene expression
11.5 SRP020657 SRR823545 Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
11.5 SRP327364 SRR15060407 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.5 SRP254459 SRR11444586 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
11.5 SRP127575 SRR6420539 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
11.4 ERP024350 ERR2061599 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
11.4 SRP041468 SRR1985011 Oryza sativa Japonica Group Transcriptome or Gene expression
11.4 DRP000315 DRR000753 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.4 DRP000315 DRR000747 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.4 SRP331960 SRR15411204 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.3 SRP356482 SRR17720828 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.3 SRP115210 SRR5925505 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.3 SRP309118 SRR13847383 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.3 SRP115210 SRR5925503 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP115210 SRR5925506 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP093884 SRR5052733 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
11.3 SRP115030 SRR5909336 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.3 SRP270778 SRR12165252 RNA-seq analysis of different sub-regions of developing grains in rice
11.3 SRP115210 SRR5925504 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP092175 SRR4457235 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.3 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP327364 SRR15060455 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.2 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP131107 SRR6502107 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
11.2 SRP106796 SRR5526312 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
11.2 SRP041468 SRR1264024 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP056884 SRR1952808 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.2 DRP000716 DRR002714 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.2 DRP000716 DRR002716 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.2 SRP151597 SRR7450901 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
11.2 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP170932 SRR8247777 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
11.2 SRP127575 SRR6420538 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
11.2 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP229366 SRR10423445 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
11.2 SRP327364 SRR15060435 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.2 SRP041468 SRR1985027 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP167327 SRR8140269 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
11.2 SRP167327 SRR8140270 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
11.2 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.2 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.1 SRP229366 SRR10423447 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
11.1 SRP056884 SRR1952809 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.1 SRP229366 SRR10423439 Next Generation Sequencing Facilitates Quantitative Analysis of ZH11 and ONAC127/ONAC129 transgenic plants Transcriptomes
11.1 DRP000315 DRR000749 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.1 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.1 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP151597 SRR7450903 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
The output is the 100 samples with the largest contribution to the coexpression.



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